Patent application title: INHIBITION OF CANCER GROWTH AND METASTASIS
Inventors:
IPC8 Class: AA61K3817FI
USPC Class:
1 1
Class name:
Publication date: 2018-07-26
Patent application number: 20180207234
Abstract:
The present invention relates to methods for treating or preventing
cancer and metastasis. More particularly, the present invention relates
to methods for treating or preventing cancer by decreasing the expression
and/or activity of Flightless I. Also provided are methods for inhibiting
the growth of a cancerous cell and methods for inhibiting formation
and/or growth of a tumour which also rely on decreasing the expression
and/or activity of Flightless I. The present invention also extends to
methods for diagnosing cancer, methods for determining if a subject is
susceptible to developing cancer, and methods for assessing progression
of cancer based on the finding that increased expression and/or activity
of Flightless I is associated with cancer development, growth and
metastasis. The present invention also provides methods for screening for
a candidate therapeutic agent useful for treating or preventing cancer,
and related pharmaceutical compositions and kits.Claims:
1.-65. (canceled)
66. A method of decreasing the expression and/or activity of Flightless I in a cancerous cell, the method including the step of administration to the cell an effective amount of an agent that decreases the expression and/or activity of Flightless I, wherein the agent is selected from one or more of the group consisting of a neutralizing antibody to Flightless I or an antigen binding part of a neutralizing antibody to Flightless I, an antisense oligonucleotide that binds to Flightless I mRNA, a ribozyme that can cleave a Flightless 1 mRNA, a small interfering RNA specific for Flightless I mRNA, a microRNA specific for Flightless I mRNA, a short hairpin RNA specific for Flightless I mRNA, and an aptamer specific for Flightless I mRNA.
67. The method of claim 66, wherein the cell is a cancerous colon cell or cancerous breast cell.
68. The method of claim 66, wherein the agent is a neutralizing antibody to Flightless I or an antigen binding part of a neutralizing antibody to Flightless I.
69. The method of claim 66, wherein the agent is a small interfering RNA (siRNA) specific for Flightless I mRNA.
70. The method of claim 66, wherein the agent is a short hairpin RNA specific for Flightless I mRNA.
71. A method of inhibiting the growth of a cancerous colon cell, or inhibiting invasion and metastasis of a colon cancer cell, the method including the step of administration to the cell an effective amount of an agent that decreases the expression and/or activity of Flightless I, wherein the agent is a neutralizing antibody to Flightless I or an antigen binding part of a neutralizing antibody to Flightless I, or is a small interfering RNA (siRNA) specific for Flightless I mRNA.
72. The method of claim 71, wherein the agent is a neutralizing antibody to Flightless I or an antigen binding part of a neutralizing antibody to Flightless I.
73. The method of claim 71, wherein the agent is a small interfering RNA (siRNA) specific for Flightless I mRNA.
74. The method of claim 71, wherein invasion and metastasis to the lung is inhibited.
Description:
PRIORITY CLAIM
[0001] This application claims priority from Australian provisional patent application number 2012905692 filed on 24 Dec. 2012, and Australian patent application number 2013202668 filed on 5 Apr. 2013, the contents of which are to be taken as incorporated herein by this reference.
FIELD OF THE INVENTION
[0002] The present invention relates generally to methods for treating or preventing cancer. More particularly, the present invention relates to methods for treating or preventing cancer which rely on decreasing the expression and/or activity of Flightless I. Such methods may also be used for inhibiting formation and/or growth of a tumour, inhibiting tumour invasion and metastasis, as well as diagnosing cancer, determining the susceptibility to developing cancer, and assessing the progression of cancer, in a subject.
BACKGROUND OF THE INVENTION
[0003] Cancer accounts for more than a tenth of all mortality worldwide, and according to the World Health Organisation cancer was responsible for 7,600,000 deaths in 2008. In Australia, in 2012 it is estimated that more than 120,700 new cases of cancer will be diagnosed (excluding basal and squamous cell carcinoma of the skin), with the most commonly reported cancers expected to be prostate cancer, followed by bowel cancer, breast cancer, melanoma of the skin and lung cancer. In the United States, more than one million new cancer cases arise each year. Of these, approximately half are classified as early-stage diseases.
[0004] As detection technologies improve and strategies for routine screening become widely adopted, the number of early stage cancers with no clear evidence of metastatic spread will increase dramatically. Therefore, the development of new and improved methods for the treatment of cancer is of vital importance. At present, common cancer therapies include the use of chemotherapeutic agents which are delivered systemically and have little or no tumour specificity, which results in the potential for harm to healthy organs in the body and causes symptoms such as myelosuppression, mucositis and alopecia. Various forms of radiation are toxic to mammalian cells and have been harnessed successfully for the treatment of cancer. Radioactive isotopes have been used to treat certain cancers, for example cancers of the thyroid and prostate. However, for logistical reasons including the considerable expense of suitable radiation delivery systems, radiation therapy is used less frequently than would otherwise be desirable. As a result, current cancer treatments are far from ideal.
[0005] Malignancies of the skin are the most commonly diagnosed cancer type worldwide. Skin cancers are divided into two types, namely melanoma and non-melanoma, with melanoma being the most serious form. Melanoma originates in melanocytes, and whilst it is not the most common type of skin cancer, it underlies the majority of skin cancer-related deaths. Indeed, each year about 48,000 deaths are registered worldwide as being due to malignant melanoma, with about 160,000 new cases of melanoma diagnosed worldwide annually.
[0006] Melanomas fall into four major categories--Superficial spreading melanoma which travels along the top layer of the skin before penetrating more deeply; Lentigo maligna which typically appears as a flat or mildly elevated mottled tan, brown, or dark brown discoloration, and which is found most often in the elderly; Nodular melanoma which occurs anywhere on the body as a dark, protuberant papule or a plaque that varies from pearl to gray to black; and Acral-lentiginous melanoma which is the most uncommon form of melanoma that arises on palmar, plantar, or subungual skin.
[0007] Metastasis of melanoma is common and occurs via lymphatics and blood vessels. Local metastasis results in the formation of nearby satellite papules or nodules that may or may not be pigmented, whilst direct metastasis to skin or internal organs can also occur. Despite many years of intensive laboratory and clinical research, there are still limited treatments for melanoma, and those that are available exhibit resistance and multiple unwanted side effects.
[0008] Non-melanoma skin cancer has two major sub-types, namely basal cell carcinoma (BCC) and squamous cell carcinoma (SCC). BCCs and SCCs of the skin represent the most common malignancies in the Caucasian population (for example a total of 1,300,000 new cases diagnosed in 2000 in the United States alone). Given that SCCs are highly invasive, metastatic, and are associated with a comparatively high risk of recurrence, they result in significant mortality. SCCs can be diagnosed by biopsy; however, SCCs are typically not as distinct as BCCs or melanomas, making detection and diagnosis difficult. Current methods of treatment, including surgery, radiotherapy, and chemotherapy, require continued monitoring due to the metastatic nature of SCCs. The development of alternative methods of detection and treatment are therefore desirable.
[0009] The incidence of non-melanoma skin cancers, including metastatic SCC, is increasing due to the aging populations in western society, and because of its enormously increased incidence among organ transplant recipients. For example, the incidence of SCC in transplant recipients is 40 to 250 times that of the general population, whereas the incidence of BCC is 10 times greater in transplant patients. SCCs in transplant patients are much more aggressive and deadly and out of the 5.1% of transplant patients who die from skin cancer, 60% had SCC and 33% had melanoma, which represents a 10-fold increase in mortality from SCC in comparison with the general population.
[0010] Colorectal cancer (CRC) originates in either the large intestine (colon) or the rectum. CRC is the third most common cancer in men and the second most common in women worldwide. In 2008, it was estimated that about 608,000 deaths worldwide could be attributed to CRC annually, accounting for 8% of all cancer deaths, and making CRC the fourth most common cause of death from cancer worldwide. CRC arises from the mucosa forming the inner lining of colon and rectum. Like any other mucosa, it needs to be regenerated and proliferates at a high rate (about one third of all fecal matter are mucosa cells), and is thus susceptible to abnormal growth. In fact, abnormal colonic mucosal growth can be detected in about 40% of all persons over the age of 55 years.
[0011] Current technologies to detect mucosal neoplasia (polyps/adenoma) and CRC can be categorized into three classes: In vitro diagnostics--a specimen/sample (blood, stool, or urine) is taken from the test person and analyzed for one or more biomarkers as surrogate markers for colorectal neoplasia/cancer. Exemplary tests include the guaic fecal occult blood test (gFOBT) or the immunological fecal occult blood test (iFOBT); Imaging methods without interventional capabilities, such as X-ray, double contrast barium enema (DCBE), video capsule endoscopy, or computed tomographic coionography; and Imaging methods with interventional capabilities, such as flexible sigmoidoscopy, colonoscopy, laparoscopy, or open surgery.
[0012] Unfortunately, the clinical utility of a stool-based screen for CRC is limited because individuals are often unwilling to take the test repeatedly due to the nature of the test. Furthermore, the US National Institutes of Health reported that compliance with endoscopy (flexible sigmoidoscopy or colonoscopy) is dependent on the education and income of the population. Colonoscopy is also an invasive procedure, which is not only inconvenient but may be associated with health risks. Therefore, the overall clinical utility of all endoscopy-based CRC screening is also limited. Accordingly, the current clinical utility of a test for detection of CRC depends not only on its performance characteristics, i.e., sensitivity and specificity, but also on acceptance by the patients and the medical community. Alternative therapies would be welcome.
[0013] Lung cancer has been one of the most common cancers for several decades and causes the largest number of cancer deaths in the world. In 2008, there were an estimated 1,610,000 newly diagnosed cases in the world (12.7% of the total) with 1,380,000 deaths (18.2% of the total) caused by cancer of the lung. This exceeded the death rates of breast, prostate and colorectal cancer combined. Lung cancer is categorized into two types, namely small cell lung cancer (SCLC) and non-small cell lung cancer (NSCLC). About 85% of lung cancer cases are categorized as NSCLC, which includes adenocarcinoma, squamous cell carcinoma, and adenosquamous cell carcinoma.
[0014] The basis for tumor progression and the aggressive biological behavior of lung cancer remains poorly understood. As with other cancers, the survival rate for lung cancer is much higher if it is detected early. However, lung cancer is difficult to diagnose in the early stages because it may manifest no outward symptoms. When symptoms do occur, they can vary depending on the type, location and spreading pattern of the cancer, and therefore, are not readily associated with cancer. Often, lung cancer is only correctly diagnosed when it has already metastasized. When the disease is detected in an early, localized stage and can be removed surgically, the five-year survival rate can reach 85%. But once the cancer has spread to other organs, especially to distant sites, as few as 2% of patients survive five years.
[0015] Potential screening tools to detect early stage lung cancer are chest X-ray and computed tomography (CT) scanning. However, the high cost and high rate of false positives render these radiographic tools impractical for routine widespread use. PET scans are another diagnostic option, but PET scans are costly and generally not amenable for use in screening programs. Currently, age and smoking history are the only two risk factors that have been used as selection criteria by the large screening studies. Accordingly, novel lunger cancer detection methods and therapeutic applications are required.
[0016] Cancer metastasis involves multiple biological processes driven by an ensemble of genetic alterations. It is understood that either metastasis-conferring genetic events are acquired stochastically as a tumor grows and expands, or that tumors are "hard-wired" with pro-metastatic genetic alterations early in the evolution of tumors and that these alterations also drive the genesis of cancer. Despite a wealth of knowledge at the molecular and genetic level about major cancer forms in humans, including skin, colorectal, lung, breast, liver, pancreas, and other cancers, there is still a very poor understanding of the molecular events underpinning tumor progression and metastasis. Accordingly, there remains a need to understand which patients will have recurrence of their tumors and ultimately a lethal outcome, and how early diagnosis and treatment may impact these outcomes.
[0017] In light of the above, there is a need for the identification of new molecular targets responsible for the aetiology, growth and spread of cancer. Such targets may serve as a basis for the therapeutic intervention and diagnosis of cancer.
[0018] Reference to any prior art in this specification is not, and should not be taken as, an acknowledgment or any form of suggestion that this prior art forms part of the common general knowledge in any country.
SUMMARY OF THE INVENTION
[0019] The present invention arises out of studies into the role of the Flightless I gene and its encoded protein in cancer development and metastasis. These studies have shown that an increased level of Flightless I is associated with tumour development and progression in vivo.
[0020] Accordingly, in a first aspect, the present invention provides a method of treating or preventing cancer in a subject, the method including the step of decreasing the expression and/or activity of Flightless I in the subject.
[0021] In one embodiment, decreasing the expression and/or activity of Flightless I in the subject includes administration to the subject of an effective amount of an agent that decreases the expression and/or activity of Flightless I.
[0022] In a second aspect, the present invention provides a method of inhibiting the growth of a cancerous cell, the method including the step of decreasing the expression and/or activity of Flightless I in the cell.
[0023] In one embodiment, decreasing the expression and/or activity of Flightless I in the cell includes administration to the cell of an effective amount of an agent that decreases the expression and/or activity of Flightless I.
[0024] In a third aspect, the present invention provides a method of inhibiting formation and/or growth of a tumour in a subject, or of inhibiting tumour invasion and metastasis in a subject, the method including the step of decreasing the expression and/or activity of Flightless I in the subject.
[0025] In one embodiment, decreasing the expression and/or activity of Flightless I in the subject includes administration to the subject of an effective amount of an agent that decreases the expression and/or activity of Flightless I.
[0026] In some embodiments of the first to third aspects of the invention, the agent is selected from one or more of the group consisting of a drug, a small molecule, a nucleic acid, an oligonucleotide, an oligopeptide, a polypeptide, a protein, an enzyme, a polysaccharide, a glycoprotein, a hormone, a receptor, a ligand for a receptor, a co-factor, an antisense oligonucleotide, a ribozyme, a small interfering RNA, a microRNA, a short hairpin RNA, a lipid, an aptamer, a virus, and an antibody or an antigen binding part thereof. In some embodiments, the agent is a neutralising antibody to Flightless I, or an antigen binding part thereof. In some embodiments, the agent is a Flightless I binding protein. In one embodiment, the Flightless I binding protein is FLAP-1.
[0027] In some embodiments, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
[0028] In a fourth aspect, the present invention provides a method of diagnosing cancer in a subject, the method including the steps of:
[0029] measuring the level of expression and/or activity of Flightless I in the subject;
[0030] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0031] diagnosing cancer in the subject on the basis of the comparison.
[0032] In one embodiment, a level of expression and/or activity of Flightless I in the subject that is higher than the reference level of expression and/or activity for Flightless I is indicative of cancer in the subject.
[0033] In a fifth aspect, the present invention provides a method of determining if a subject is susceptible to developing cancer, the method including the steps of:
[0034] measuring the level of expression and/or activity of Flightless I in the subject;
[0035] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0036] determining if the subject is susceptible to developing cancer on the basis of the comparison.
[0037] In one embodiment, a level of expression and/or activity of Flightless I in the subject that is higher than the reference level of expression and/or activity for Flightless I indicates that the subject is susceptible to cancer.
[0038] In a sixth aspect, the present invention provides a method of assessing progression of cancer in a subject, the method including the steps of:
[0039] measuring the level of expression and/or activity of Flightless I in the subject;
[0040] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0041] assessing the progression of cancer in the subject on the basis of the comparison.
[0042] In one embodiment, the subject is undergoing treatment for the cancer. In some embodiments of the sixth aspect of the invention, a level of expression and/or activity of Flightless I in the subject that is higher than the reference level of expression and/or activity for Flightless I is indicative of the progression of cancer in the subject.
[0043] In some embodiments of the fourth to sixth aspects of the invention, the level of expression and/or activity of Flightless I is measured in a sample obtained from the subject.
[0044] In some embodiments, measuring the level of expression of Flightless I includes measuring the level of Flightless I RNA or protein. In one embodiment, the Flightless I RNA is Flightless I mRNA.
[0045] In some embodiments, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
[0046] In a seventh embodiment, the present invention provides a method of screening for a candidate therapeutic agent useful for treating or preventing cancer in a subject, the method including the step of assaying the candidate therapeutic agent for activity in decreasing the level of expression and/or activity of Flightless I, wherein an agent that decreases the level of expression and/or activity of Flightless I is a candidate therapeutic agent useful for treating or preventing cancer in the subject.
[0047] In one embodiment, measuring the level of expression of Flightless I includes measuring the level of Flightless I RNA or protein. In one embodiment, the Flightless I RNA is Flightless I mRNA.
[0048] In some embodiments, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
[0049] In an eighth aspect, the present invention provides a pharmaceutical composition when used for treating or preventing cancer in a subject, the composition including an effective amount of an agent that decreases expression and/or activity of Flightless I.
[0050] In one embodiment, the agent is selected from one or more of the group consisting of a drug, a small molecule, a nucleic acid, an oligonucleotide, an oligopeptide, a polypeptide, a protein, an enzyme, a polysaccharide, a glycoprotein, a hormone, a receptor, a ligand for a receptor, a co-factor, an antisense oligonucleotide, a ribozyme, a small interfering RNA, a microRNA, short hairpin RNA, a lipid, an aptamer, a virus, and an antibody or an antigen binding part thereof.
[0051] In some embodiments, the agent is a neutralising antibody to Flightless I, or an antigen binding part thereof. In some embodiments, the agent is a Flightless I binding protein. In one embodiment, the Flightless I binding protein is FLAP-1.
[0052] In some embodiments, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
[0053] In a ninth aspect, the present invention provides a kit for diagnosing cancer in a subject, determining if a subject is susceptible to developing cancer, or assessing progression of cancer in a subject, the kit including means for measuring the level of expression and/or activity of Flightless I in the subject.
[0054] In one embodiment, a level of expression and/or activity of Flightless I in the subject that is higher than a reference level of expression and/or activity for Flightless I diagnoses cancer in the subject, is indicative that the subject is susceptible to developing cancer, or is indicative of progression of cancer in the subject.
[0055] In some embodiments, the level of expression and/or activity of Flightless I is measured in a sample obtained from the subject.
[0056] In some embodiments, measuring the level of expression of Flightless I includes measuring the level of Flightless I RNA or protein. In one embodiment, the Flightless I RNA is Flightless I mRNA.
[0057] In some embodiments, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
BRIEF DESCRIPTION OF THE FIGURES
[0058] For a further understanding of the aspects and advantages of the present invention, reference should be made to the following detailed description and Examples, taken in conjunction with the accompanying Figures.
[0059] FIG. 1--an autoradiograph showing expression of the Flightless I protein in various melanoma cell lines. The results are representative of two independent experiments.
[0060] FIG. 2--images of chemically induced squamous cell carcinoma (SCC) development in Flightless I genetic mice. A: mice heterozygous for Flightless I (Flii.sup.+/-); B: wild type mice (WT); and C: transgenic mice overexpressing Flightless I (Flii.sup.Tg/Tg).
[0061] FIG. 3--graphs depicting characteristics of SCC tumour development in Flii.sup.+/-, WT, and Flii.sup.Tg/Tg mice. A: tumour volume at weeks 10, 11 and 12 post chemical inducement; B: percentage of mice developing SSC tumours in each of the Flii.sup.+/-, WT, and Flii.sup.Tg/Tg groups.
[0062] FIG. 4--representative images of SCC tumour development in Flii.sup.+/- (panels A and D), WT (panels B and E), and Flii.sup.Tg/Tg (panels C and F) mice at low magnification (.times.4), illustrating histological features of SCC in each of the three groups of mice.
[0063] FIG. 5--representative images of SCC tumour development in A: Flii.sup.+/-, B: WT, and C: Flii.sup.Tg/Tg mice illustrating epithelial origin of SCC tumors in all three genotypes (arrow). Magnification .times.20. n=12. Scale bar=50 .mu.m.
[0064] FIG. 6--histological representations of SCC (panels A to C) and Epidermal Bullosa-SCC (EB-SCC--panels D to F) tumours.
[0065] FIG. 7--representative images of the expression characteristics of Flightless I protein in normal healthy skin (panel A), SCC lesions of otherwise healthy patients (panels B to D) and SCC lesions from Epidemal Bullosa patients (EB-SCC--panels E to G). Panel H is a graphical analysis of the results represented in panels A to G.
[0066] FIG. 8--representative images of the expression characteristics of Flightless I protein in normal healthy skin (panel A), and the skin of melanoma (panel B), SCC (panel C) and BCC (panel D) patients. e=epidermis, d=dermis, dotted line=basement membrane. Magnification .times.20. Scale bar=100 .mu.m. Panel E--Flightless I expression in the serum of SCC, BCC and melanoma (MEL) patients, and in a Normal Human Serum (NHS) control as determined by Western Blotting. .beta.-tubulin (.beta.-tub)=loading control.
[0067] FIG. 9--representative images (A) and graphical analysis (B) of Flightless I expression in SCC tumours induced in wild-type (WT SCC) and Flightless I overexpressing mice (Flii.sup.Tg/Tg SCC). n=12. Magnification=.times.20. Scale bar=100 .mu.m. Figure is representative of two independent experiments.
[0068] FIG. 10--images of the localisation of Flightless I protein in SCC lesions of otherwise healthy patients (panels A and D), and SCC lesions from Epidemal Bullosa patients (EB-SCC--panels G and J). Panels B and E show the localisation of the PCNA protein (a marker of proliferating cells) in SCC lesions of otherwise healthy patients, and panels H and K show the localisation of PCNA in SCC lesions from Epidemal Bullosa patients (EB-SCC). Panels C, F, I and L show the merged images of panels A/B, D/E, G/H, and J/K, respectively.
[0069] FIG. 11--results of expression analysis of Flightless I protein (Flii) and the Flightless I binding protein (FLAP-1). A: expression of Flii and FLAP-1 in different SCC (SCC-IC1, SCC-IC2, and MET-1) and EB-SCC (CC, SBK, and GP) cell lines. B: expression of Flii and FLAP-1 in the SCC-IC1 cell line in the absence (SCC-IC1 SIC) and presence (SCC-IC1 siCol7) of an siRNA to Col7. C: localisation of expression of Flightless I (Flii) protein in EB-SCC keratinocytes (SBK and GP) in a 3 dimensional organotypical model of EB-SCC.
[0070] FIG. 12--results of the presence of Flightless I inhibitors (FLAP-1 and FnAb) on Flightless I protein expression in sporadic SCC (MET-1) and EB-SCC (CC) cell lines. A: histological representation of tumour invasion in the absence (MET-1) and presence (MET-1+rFLAP-1) of FLAP-1; B: a graph showing the depth of tumour invasion in the absence (CC and MET-1) and presence (CC+rFLAP-1 and MET-1+rFLAP-1) of FLAP-1; C: histological representation of tumour invasion in the absence (CC+IgG and MET-1+IgG) and presence (CC+FnAb and MET-1+FnAb) of a neutralising antibody to Flightless I (FnAb); D: a graph showing the depth of tumour invasion in the absence (CC+IgG and MET-1+IgG) and presence (CC+FnAb and MET-1+FnAb) of a neutralising antibody to Flightless I (FnAb).
[0071] FIG. 13--results of decreasing Flightless I (Flii) expression/activity by FLAP-1 on TGF-.beta. signalling in SCC (CC) and EB-SCC (MET-1) cells. A: histological representation of the results for CC cells in the absence (cc PBS control) and presence (cc+rFLAP-1) of FLAP-1 (left panels). A graphical representation of the results is shown on the right of the panels; B: histological representation of the results for MET-1 cells in the absence (MET-1 PBS control) and presence (MET-1+rFLAP-1) of FLAP-1 (left panels). A graphical representation of the results is shown on the right of the panels.
[0072] FIG. 14--results of decreasing Flightless I (Flii) expression/activity in wild-type mice using a neutralising antibody to Flii (FnAb) on SCC growth and severity. A--representative macroscopic images of wild-type mice treated with FnAb or IgG antibodies at week ten of the experiment. B--macroscopic assessment of tumour volume showing decreased tumour growth in FnAb treated mice with significantly decreased tumour volume from week 4 of the experiment. C--representative images of haematoxylin and eosin stained sections of wild-type mice treated with FnAb or IgG antibodies at week ten of the experiment. Microscopic analysis of tumour length (D) and width (E) showing decreased SCC tumour growth and severity in FnAb treated mice with IgG control antibody. n=12/treatment.
[0073] FIG. 15--representative images (A) of Flightless I overexpressing mice (Flii.sup.Tg/Tg) pre-treated with an antibody to Flightless I (FnAb) or IgG and MCA induced for SCC development over a 10 week period. B--a graph showing that Flighltess I overexpressing mice treated with FnAb demonstrated significantly reduced macroscopic tumour volume from week 8 of the experiment. n=12.
[0074] FIG. 16--graph showing the effect of Flightless I expression in other cancer types. Mice were injected with colon cancer cells and the growth of primary tumour development was analysed. FliItg/-: mice overexpressing Flightless I; BALB/c WT: wildtype mice; and FliI+/-: mice with reduced Flightless I expression.
[0075] FIG. 17--analysis of the development of metastatic nodules in lung tissue of the mice of FIG. 12 which were injected with colon cancer cells. A: histological representations of the results. Top panels: wildtype mice; middle panels: FliI+/- mice; bottom panels: FliItg/- mice. B: graphical representation of the number of tumour nodules in lung tissue from each of three mice groups. Metstatic nodules are represented by arrows.
[0076] FIG. 18--graphs summarising analysis of the expression of .alpha.-SMA in Flightless I overexpressing mice (FliItg/-), wildtype mice (BALB/c WT) and mice with reduced Flightless I expression (FliI+/-) in primary (A) and metastatic (B) tumours. (n=10).
[0077] FIG. 19--graphs summarising analysis of the expression of .alpha.-SMA in unstimulated primary lung fibroblasts from Flightless I overexpressing mice (FliItg/-) (panel B) compared to lung fibroblasts from Flightless I heterozygous mice (FliI+/-) (panel A), and a side-by-side comparison of the same (panel C). (n=10).
DESCRIPTION OF THE INVENTION
[0078] Nucleotide sequences are referred to herein by a sequence identifier number (SEQ ID NO:). A summary of the sequence identifiers is provided in Table 1. A sequence listing is also provided.
TABLE-US-00001 TABLE 1 Summary of Sequence Identifiers Sequence Identifier Sequence SEQ ID NO: 1 Human Flightless|mRNA sequence - variant 1 (NM_002018.3) SEQ ID NO: 2 Human Flightless|amino acid sequence - variant 1 (NP_002009.1) SEQ ID NO: 3 Human Flightless|mRNA sequence - variant 2 (NM_001256264.1) SEQ ID NO: 4 Human Flightless|amino acid sequence - variant 2 (NP_001243193.1) SEQ ID NO: 5 Human Flightless|mRNA sequence - variant 3 (NM_001256265.1) SEQ ID NO: 6 Human Flightless|amino acid sequence - variant 3 (NP_001243194.1) SEQ ID NO: 7 Human FLAP-1 mRNA sequence - variant 1 (NM_001137550.1) SEQ ID NO: 8 Human FLAP-1 amino acid sequence - variant 1 (NP_001131022.1) SEQ ID NO: 9 Human FLAP-1 mRNA sequence - variant 2 (NM_001137551.1) SEQ ID NO: 10 Human FLAP-1 amino acid sequence - variant 2 (NP_001131023.1) SEQ ID NO: 11 Human FLAP-1 mRNA sequence - variant 3 (NM_001137552.1) SEQ ID NO: 12 Human FLAP-1 amino acid sequence - variant 3 (NP_001131024.1) SEQ ID NO: 13 Human FLAP-1 mRNA sequence - variant 4 (NM_004735.3) SEQ ID NO: 14 Human FLAP-1 amino acid sequence - variant 4 (NP_004726.2) SEQ ID NO: 15 Human FLAP-1 mRNA sequence - variant 5 (NM_001137553.1) SEQ ID NO: 16 Human FLAP-1 amino acid sequence - variant 5 (NP_001131025.1)
[0079] As set out above, the present invention is predicated, in part, on the identification of an association between the Flightless I gene and cancer development, progression and metastasis. For example, the inventors have determined that the level of Flightless I protein is increased in cancer cells, and that overexpression of Flightless I in vivo leads to tumour development and progression. Furthermore, decreasing expression and/or activity of Flightless I leads to a decrease in tumour invasion and metastatis.
[0080] Accordingly, in a first aspect, the present invention provides a method of treating or preventing cancer in a subject, the method including the step of decreasing the expression and/or activity of Flightless I in the subject.
[0081] As used herein, "Flightless I" is to be understood to refer to a gene that encodes a protein with a gelsolin-like actin binding domain and an N-terminal leucine-rich repeat-protein protein interaction domain. Flightless I was originally identified in Drosophila where mutations in the gene caused defects in the flight muscles which, consequently, were unable to support flight. The Flightless I gene has since been found to be present in a number of species, including human, chimpanzee, baboon, monkey, mouse, zebrafish, frog, dog and yeast. Indeed, between the higher order species, the Flightless I protein is highly conserved suggesting that it carries out important, conserved functions.
[0082] The human Flightless I gene encodes a 140 kD protein which is a member of the gelsolin family of proteins. The human gene encodes three isoforms variants, the mRNA and amino acid sequences of which are set out in SEQ ID NOs: 1 to 6, and represented by GenBank Accession Numbers NM_002018.3 and NP_002009.1 (variant 1), NM_001256264.1 and NP_001243193.1 (variant 2), and NM_001256265.1 and NP_001243194.1 (variant 3). Further details of the Flightless I gene in human and other species may be accessed from the GenBank database at the National Centre for Biotechnology Information (NCBI) (ncbi.nlm.nih.gov). For example, the Gene ID number for human Flightless I is 2314, for chimpanzee is 454486, for baboon is 101019011, for monkey is 700471, for mouse is 14248, for zebrafish is 560281, for frog is 444748, for dog is 479521, and for yeast is 176215.
[0083] Further details regarding the Flightless I gene in other species can be found at the UniGene portal of the NCBI (i.e. UniGene Hs. 513984--ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=513984&ALLPROT=1). Alternatively, details of the nucleotide and amino acid sequence for Flightless I can be accessed from the UniProt database (uniprot.org) wherein the UniProt ID for human Flightless I is Q13045 (variant 1 and 2), and F5H407 (variant 3). The contents of the GenBank and UniProt records are incorporated herein by reference. Human Flightless I will also be referred to herein as "Flii" and "FliI".
[0084] It is to be made clear that reference herein to Flightless I, includes a reference to its naturally-occurring variants. In this regard, a "variant" of Flightless I may exhibit a nucleic acid or an amino acid sequence that is at least 80% identical, at least 90% identical, at least 95% identical, at least 98% identical, at least 99% identical, or at least 99.9% identical to native Flightless I. In some embodiments, a variant of Flightless I is expected to retain native biological activity or a substantial equivalent thereof.
[0085] As would be understood by a person skilled in the art, the term "gene" refers to a region of genomic nucleotide sequence (nuclear or mitochondrial) associated with a coding region which is transcribed and translated into a functional biomolecule (protein) composed primarily of amino acids. Accordingly, the term "gene" with respect to Flightless I may include regulatory regions (e.g. promoter regions), transcribed regions, protein coding exons, introns, untranslated regions and other functional and/or non-functional sequence regions associated with Flightless I.
[0086] The method of the first aspect of the invention requires the step of decreasing the expression and/or activity of Flightless I. As would be understood by a person skilled in the art, the term "expression" includes: (1) transcription of the Flightless I gene into a messenger RNA (mRNA) molecule; and/or (2) translation of the mRNA into the Flighltess I protein. In effect, the expression of the Flightless I gene can be decreased at the RNA and/or protein stages of expression. With respect to the term "activity", this should be taken to mean the normal function of the translated Flightless I protein. For example, Flightless I belongs to the Gelsolin family of actin severing proteins which function in the cytoplasm of cells where they control actin organisation. This is achieved by severing pre-existing actin filaments, capping the fast growing filament ends and nucleating or bundling actin filaments to enable filament reassembly into new cytoskeletal structures. Several members of this Gelsolin family, including Flightless I, also have roles in regulating gene transcription and act as nuclear receptor co-activators. Flightless I is a multifunctional protein with a unique structure containing both a gelsolin domain and a Leuicine Rich Repeat domain allowing Flightless I to act as a multifunctional protein with major roles in wound healing. Flightless I negatively regulates wound healing through regulating cellular migration and proliferation, cellular adhesion and spreading. Recent findings have confirmed its role in actin polymerisation and capping of actin monomers.
[0087] Reference herein to "decrease" with respect to the expression of Flightless I, whether at the transcriptional (mRNA) or translational (protein) stage is intended to mean, for example, at least a 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, 1.1-fold, 1.2-fold, 1.3-fold, 1.4-fold, 1.5-fold, 1.6-fold, 1.7-fold, 1.8-fold, 1.9-fold, 2-fold, 2.1-fold, 2.2-fold, 2.3-fold, 2.4-fold, 2.5-fold, 2.6-fold, 2.7-fold, 2.8-fold, 2.9-fold, 3-fold, 3.1-fold, 3.2-fold, 3.3-fold, 3.4-fold, 3.5-fold, 3.6-fold, 3.7-fold, 3.8-fold, 3.9-fold, 4-fold, 5-fold, 10-fold, 20 fold, 50-fold, or 100-fold or greater reduction in the level of Flightless I mRNA or protein in the affected subject. In one embodiment, the expression of Flighltess I will be decreased to a level to that observed in a healthy non-affected subject or to that observed in a non-cancerous tissue of the subject.
[0088] Reference herein to "decrease" with respect to the activity of Flightless I is intended to mean a reduction in the function of Flightless I in the affected subject. In effect, the activity of Flightless I in the affected subject is to be reduced to a level commensurate with that observed in a healthy non-affected subject and/or in normal healthy tissues of the subject. In some embodiments, the activity of Flightless I may be reduced by at least 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, 1.1-fold, 1.2-fold, 1.3-fold, 1.4-fold, 1.5-fold, 1.6-fold, 1.7-fold, 1.8-fold, 1.9-fold, 2-fold, 2.1-fold, 2.2-fold, 2.3-fold, 2.4-fold, 2.5-fold, 2.6-fold, 2.7-fold, 2.8-fold, 2.9-fold, 3-fold, 3.1-fold, 3.2-fold, 3.3-fold, 3.4-fold, 3.5-fold, 3.6-fold, 3.7-fold, 3.8-fold, 3.9-fold, 4-fold, 5-fold, 10-fold, 20 fold, 50-fold, or 100-fold or greater in the affected subject.
[0089] Methods which can be used to measure the level of expression (and decrease thereof) of Flightless I in the subject would be known in the art. With respect to measuring a decrease in the transcription of the Flightless I gene into mRNA, levels of mRNA may be measured by techniques which include, but are not limited to, Northern blotting, RNA in situ hybridisation, reverse-transcriptase PCR (RT-PCR), real-time (quantitative) RT-PCR, microarrays, or "tag based" technologies such as SAGE (serial analysis of gene expression). Microarrays and SAGE may be used to simultaneously quantitate the expression of more than one gene. Primers or probes may be designed based on nucleotide sequence of the Flightless I gene or transcripts thereof. Methodology similar to that disclosed in Paik et al., 2004 (NEJM, 351(27): 2817-2826), or Anderson et al., 2010 (Journal of Molecular Diagnostics, 12(5): 566-575) may be used to measure the expression of the Flightless I gene. Many methods are also disclosed in standard molecular biology text books such as Sambrook et al. (Molecular Cloning--A Laboratory Manual, 3.sup.rd Ed., Cold Spring Harbor Laboratory Press, 2000).
[0090] With respect to RT-PCR, the first step is typically the isolation of total RNA from a sample obtained from the subject under investigation. A typical sample in this instance would be a tumour biopsy sample (and corresponding normal tissue if possible), although other sample sources are contemplated as described below. If the source of RNA is from a tumour, RNA can also be extracted, for example, from frozen or archived paraffin-embedded and fixed (e.g. formalin-fixed) tissue samples previously obtained from the subject. Messenger RNA (mRNA) may be subsequently purified from the total RNA sample. The total RNA sample (or purified mRNA) is then reverse transcribed into cDNA using a suitable reverse transcriptase. The reverse transcription step is typically primed using oligo-dT primers, random hexamers, or primers specific for the Flightless I gene, depending on the RNA template. The cDNA derived from the reverse transcription reaction then serves as a template for a typical PCR reaction. In this regard, two oligonucleotide PCR primers specific for the Flightless I gene are used to generate a PCR product. A third oligonucleotide, or probe, designed to detect a nucleotide sequence located between the other two PCR primers is also used in the PCR reaction. The probe is non-extendible by the Taq DNA polymerase enzyme used in the PCR reaction, and is labelled with a reporter fluorescent dye and a quencher fluorescent dye. Any laser-induced emission from the reporter dye is quenched by the quenching dye when the two dyes are located close together, as they are on the probe. During the PCR amplification reaction, the Taq DNA polymerase enzyme cleaves the probe in a template-dependent manner. The resultant probe fragments disassociate in solution, and signal from the released reporter dye is freed from the quenching effect of the second fluorophore. One molecule of reporter dye is liberated for each new molecule synthesized, and detection of the unquenched reporter dye provides the basis for quantitative interpretation of the data.
[0091] In real-time RT-PCR the amount of product formed, and the timing at which the product is formed, in the PCR reaction correlates with the amount of starting template. RT-PCR product will accumulate quicker in a sample having an increased level of mRNA compared to a standard or "normal" sample. Real-time RT-PCR measures either the fluorescence of DNA intercalating dyes such as Sybr Green into the synthesized PCR product, or can measure PCR product accumulation through a dual-labelled fluorigenic probe (i.e., TaqMan probe). The progression of the RT-PCR reaction can be monitored using PCR machines such as the Applied Biosystems' Prism 7000 or the Roche LightCycler which measure product accumulation in real-time. Real-time RT-PCR is compatible both with quantitative competitive PCR and with quantitative comparative PCR. The former uses an internal competitor for the target sequence for normalization, while the latter uses a normalization gene contained within the sample, or a housekeeping gene for RT-PCR.
[0092] The production and application of microarrays for measuring the level of expression of the Flighltess I gene at the transcriptional level are well known in the art. In general, in a microarray, a nucleotide sequence (for example an oligonucleotide, a cDNA, or genomic DNA) representing a portion or all of the Flighltess I gene occupies a known location on a substrate. A nucleic acid target sample (for example total RNA or mRNA) obtained from a subject of interest is then hybridized to the microarray and the amount of target nucleic acid hybridized to each probe on the array is quantified and compared to the hybridisation which occurs to a standard or "normal" sample. One exemplary quantifying method is to use confocal microscope and fluorescent labels. The Affymetrix GeneChip.TM. Array system (Affymetrix, Santa Clara, Calif.) and the Atlas.TM. Human cDNA Expression Array system are particularly suitable for quantifying the hybridization; however, it will be apparent to those of skill in the art that any similar systems or other effectively equivalent detection methods can also be used. Fluorescently labelled cDNA probes may also represent the Flighltess I nucleic acid target sample. Such probes can be generated through incorporation of fluorescent nucleotides during reverse transcription of total RNA or mRNA extracted from a sample of the subject to be tested. Labelled cDNA probes applied to the microarray will hybridize with specificity to the equivalent spot of DNA on the array. Quantitation of hybridization of each arrayed element allows for assessment of corresponding mRNA abundance in the sample compared to the abundance observed in a standard or "normal" sample. With dual colour fluorescence, separately labelled cDNA probes generated from two sources of RNA are hybridized pairwise to the array. The relative abundance of the transcripts from the two sources corresponding to each specified gene is thus determined simultaneously. The miniaturized scale of the hybridization using microarray analysis affords a convenient and rapid evaluation of the expression pattern for large numbers of genes. Such methods have been shown to have the sensitivity required to detect rare transcripts, which are expressed at a few copies per cell, and to reproducibly detect at least approximately two-fold differences in the expression levels.
[0093] Methods which can be used to measure a decrease in the level of expression of Flightless I at the translational level (protein level) would be known in the art. For example, the level of Flightless I protein may be measured by techniques which include, but are not limited to, antibody-based testing (including Western blotting, immunoblotting, enzyme-linked immunosorbant assay (ELISA), radioimmunoassay (RIA), immunoprecipitation and dissociation-enhanced lanthanide fluoro immuno assay (DELFIA)), proteomics techniques, surface plasmon resonance (SPR), versatile fibre-based SPR, chemiluminescence, fluorescent polarization, phosphorescence, immunohistochemistry, immunofluorescence, matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS), as described in WO 2009/004576 (including surface enhanced laser desorption/ionization mass spectrometry (SELDI-MS), especially surface-enhanced affinity capture (SEAC), protein microarrays, surface-enhanced need desorption (SEND) or surface-enhanced photo label attachment and release (SEPAR)), matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry, microcytometry, microarray, microscopy, fluorescence activated cell sorting (FACS), and flow cytometry.
[0094] With respect to antibody-based testing methods such as immunohistochemistry and immunoblotting, antibodies or antisera, preferably polyclonal antisera, and most preferably monoclonal antibodies specific for the Flightless I protein are used to detect protein abundance in the subject. The antibodies can be detected by direct labelling of the antibodies themselves, for example with radioactive labels, fluorescent labels, hapten labels such as, biotin, or an enzyme such as horseradish peroxidase or alkaline phosphatase. Alternatively, unlabeled primary antibody may be used in conjunction with a labelled secondary antibody, comprising antisera, polyclonal antisera or a monoclonal antibody specific for the primary antibody. Immunohistochemistry protocols and kits are well known in the art and are commercially available. Antibodies can be produced by methods well known in the art, for example, by immunizing animals with the protein under investigation. Further detailed description is provided below.
[0095] Also contemplated are traditional immunoassays including, for example, sandwich immunoassays including ELISA or fluorescence-based immunoassays, as well as other enzyme immunoassays. Nephelometry is an assay performed in liquid phase, in which antibodies are in solution. Binding of the Flightless I protein to the antibody results in changes in absorbance, which are measured. In the SELDI-based immunoassay, a biospecific capture reagent for the Flightless I protein is attached to the surface of an MS probe, such as a pre-activated ProteinChip array (see below). The protein is then specifically captured on the biochip through this reagent, and the captured protein is detected by mass spectrometry (see below).
[0096] A further technique for assessing protein levels using an antibody-based platform involves the versatile fibre-based surface plasmon resonance (VeSPR) biosensor, as described in PCT International Publication No. WO 2011/113085. Traditional SPR is a well-established method for label-free bio-sensing that relies on the excitation of free electrons at the interface between a dielectric substrate and a thin metal coating. The condition under which the incoming light couples into the plasmonic wave depends on the incidence angle and the wavelength of the incoming light as well as the physical properties (dielectric constant/refractive index) of the sensor itself and the surrounding environment. For this reason, SPR is sensitive to even small variations in the density (refractive index) in the close vicinity of the sensor, and does not require the use of fluorescent labels. The small variation of refractive index induced by the binding biomolecules such as proteins onto the sensor surface, can be measured by monitoring the coupling conditions via either the incidence angle or the wavelength of the incoming light. Existing SPR systems use the bulky and expensive Krestchmann prism configuration where one side of the prism is coated with a metal such as gold or silver that can support a plasmonic wave. Alternative SPR architectures have been developed based on optical fibres with the metallic coating deposited around a short section of the fibre. This approach reduces the complexity and cost of such sensors, opening a pathway to distinctive applications such as dip sensing. The material at the sensor surface is probed by monitoring the wavelength within a broad spectrum that is absorbed due to coupling to the surface plasmon. These techniques suffer from practical limitations associated with the need for careful temperature calibration, causing difficulty in analysing large numbers of samples consistently. A novel and powerful variant of an optical-fibre based SPR sensor, known as VeSPR, has been developed recently. VeSPR has a number of demonstrated advantages over existing SPR techniques including: (i) higher signal-to-noise ratio thus higher sensitivity; (ii) self-referencing of the transducing signal thus avoiding expensive/bulky temperature control; and (iii) the ability to perform multiplexed detection of different analytes using a single fibre.
[0097] Proteomics can also be used to analyse the expression level of Flightless I protein present in a sample at a certain point of time. In particular, proteomic techniques can be used to assess the global changes of protein expression in a sample (also referred to as expression proteomics). Proteomic analysis typically includes: (i) separation of individual proteins in a sample by 2-D gel electrophoresis (2-D PAGE); (ii) identification of the individual polypeptides recovered from the gel, for example by mass spectrometry or N-terminal sequencing; and (iii) analysis of the data using bioinformatics.
[0098] Protein microarrays (also termed biochips) may also be used to determine the level of Flightless I protein in a sample. Many protein biochips are described in the art, including for example protein biochips produced by Ciphergen Biosystems, Inc. (Fremont, Calif.), Zyomyx (Hayward, Calif.), Invitrogen (Carlsbad, Calif.), Biacore (Uppsala, Sweden) and Procognia (Berkshire, UK). Examples of such protein biochips are described in the following patents or published patent applications: U.S. Pat. Nos. 6,225,047, 6,537,749, 6,329,209, and 5,242,828, and PCT International Publication Nos. WO 00/56934 and WO 03/048768.
[0099] The level of Flightless I protein can also be measured by mass spectrometry, a method that employs a mass spectrometer to detect gas phase ions. Examples of mass spectrometers are time-of-flight, magnetic sector, quadrupole filter, ion trap, ion cyclotron resonance, electrostatic sector analyzer and hybrids of these. The mass spectrometer may be a laser desorption/ionization mass spectrometer. In laser desorption/ionization mass spectrometry, the Flightless I protein to be detected is placed on the surface of a mass spectrometry probe, a device adapted to engage a probe interface of the mass spectrometer and to present the protein to ionizing energy for ionization and introduction into a mass spectrometer. A laser desorption mass spectrometer employs laser energy, typically from an ultraviolet laser, but also from an infrared laser, to desorb analytes from a surface, to volatilize and ionize them and make them available to the ion optics of the mass spectrometer. The analysis of Flightless I protein by LDI can take the form of MALDI or of SELDI, as described below.
[0100] The SELDI method is described, for example, in U.S. Pat. Nos. 5,719,060 and 6,225,047, and relates to a method of desorption/ionization gas phase ion spectrometry (e.g. mass spectrometry) in which an analyte (in this instance the Flightless I protein to be detected) is captured on the surface of a SELDI mass spectrometry probe. SELDI also encompasses affinity capture mass spectrometry, surface-enhanced affinity capture (SEAC) and immuno-capture mass spectrometry (icMS) as described by Penno M A et al. (2012) Res. Vet. Sci. 93: 611-617. These platforms involve the use of probes that have a material on the probe surface that captures proteins through a non-covalent affinity interaction (adsorption) between the material and the protein. The material is variously called an "adsorbent," a "capture reagent," an "affinity reagent" or a "binding moiety." Such probes can be referred to as "affinity capture probes" and as having an "adsorbent surface." The capture reagent can be any material capable of binding a protein. The capture reagent is attached to the probe surface by physisorption or chemisorption. The probes, which may take the form of a functionalised biochip or magnetic bead, may have the capture reagent already attached to the surface, or the probes are pre-activated and include a reactive moiety that is capable of binding the capture reagent, e.g. through a reaction forming a covalent or coordinate covalent bond. Epoxide and acyl-imidizole are useful reactive moieties to covalently bind protein capture reagents such as antibodies or cellular receptors. Nitrilotriacetic acid and iminodiacetic acid are useful reactive moieties that function as chelating agents to bind metal ions that interact non-covalently with histidine containing proteins. Adsorbents are generally classified as chromatographic adsorbents and biospecific adsorbents.
[0101] A chromatographic adsorbent refers to an adsorbent material typically used in chromatography. Chromatographic adsorbents include, for example, ion exchange materials, metal chelators (e.g. nitrilotriacetic acid or iminodiacetic acid), immobilized metal chelates, hydrophobic interaction adsorbents, hydrophilic interaction adsorbents, dyes, simple biomolecules (e.g. nucleotides, amino acids, simple sugars and fatty acids) and mixed mode adsorbents (e.g. hydrophobic attraction/electrostatic repulsion adsorbents).
[0102] A biospecific adsorbent refers to an adsorbent comprising a biomolecule, e.g. a nucleic acid molecule (e.g. an aptamer), a polypeptide, a polysaccharide, a lipid, a steroid or a conjugate of these (e.g. a glycoprotein, a lipoprotein, a glycolipid, a nucleic acid (e.g. DNA-protein conjugate). In certain instances, the biospecific adsorbent can be a macromolecular structure such as a multiprotein complex, a biological membrane or a virus. Examples of biospecific adsorbents are antibodies, receptor proteins and nucleic acids. Biospecific adsorbents typically have higher specificity for a target protein than chromatographic adsorbents.
[0103] In general, a probe with an adsorbent surface is contacted with a sample being tested for a period of time sufficient to allow the protein under investigation (i.e. Flightless I) to bind to the adsorbent. After an incubation period, the substrate is washed to remove unbound material. Any suitable washing solutions can be used; preferably, aqueous solutions are employed. The extent to which molecules remain bound can be manipulated by adjusting the stringency of the wash. The elution characteristics of a wash solution can depend, for example, on pH, ionic strength, hydrophobicity, degree of chaotropism, detergent strength, and temperature. Unless the probe has both SEAC and SEND properties (as described herein), an energy absorbing molecule then is applied to the substrate with the bound protein.
[0104] In a further approach, the Flightless I protein can be captured with a solid-phase bound immuno-adsorbent that has antibodies that specifically bind to the protein. After washing the adsorbent to remove unbound material, the protein is eluted from the solid phase and is detected by applying it to a biochip that binds the protein.
[0105] Flightless I protein which is bound to the substrates are detected in a gas phase ion spectrometer such as a time-of-flight mass spectrometer. The protein is ionized by an ionization source such as a laser, the generated ions are collected by an ion optic assembly, and then a mass analyzer disperses and analyzes the passing ions. The detector then translates information of the detected ions into mass-to-charge ratios. Detection of protein typically will involve detection of signal intensity. Thus, both the quantity and mass of the protein can be determined.
[0106] Another method of laser desorption mass spectrometry is called surface-enhanced neat desorption (SEND). SEND involves the use of probes comprising energy absorbing molecules that are chemically bound to the probe surface ("SEND probe"). The phrase "energy absorbing molecules" (EAM) denotes molecules that are capable of absorbing energy from a laser desorption/ionization source and, thereafter, contribute to desorption and ionization of analyte molecules in contact therewith. The EAM category includes molecules used in MALDI, frequently referred to as "matrix," and is exemplified by cinnamic acid derivatives, sinapinic acid (SPA), cyano-hydroxy-cinnamic acid (CHCA) and dihydroxybenzoic acid, ferulic acid, and hydroxyaceto-phenone derivatives. The energy absorbing molecule may be incorporated into a linear or cross-linked polymer, e.g. a polymethacrylate. For example, the composition can be a co-polymer of .alpha.-cyano-4-methacryloyloxycinnamic acid and acrylate. Alternatively, the composition may be a co-polymer of .alpha.-cyano-4-methacryloyloxycinnamic acid, acrylate and 3-(tri-ethoxy)silyl propyl methacrylate, or may be a co-polymer of .alpha.-cyano-4-methacryloyloxycinnamic acid and octadecylmethacrylate ("CI 8 SEND"). SEND is further described in U.S. Pat. No. 6,124,137 and PCT International Publication No. WO 03/64594.
[0107] SEAC/SEND is a version of laser desorption mass spectrometry in which both a capture reagent and an energy absorbing molecule are attached to the sample presenting surface. SEAC/SEND probes will therefore allow the capture of Flightless I protein through affinity capture and ionization/desorption without the need to apply external matrix. The CI 8 SEND biochip is a version of SEAC/SEND, comprising a CI 8 moiety which functions as a capture reagent, and a CHCA moiety which functions as an energy absorbing moiety.
[0108] Another version of LDI is called surface-enhanced photolabile attachment and Release (SEPAR). SEPAR involves the use of probes having moieties attached to the surface that can covalently bind Flightless I protein, and then release the protein through breaking a photolabile bond in the moiety after exposure to light, e.g. to laser light. SEPAR and other forms of SELDI are readily adapted to detecting Flightless I protein.
[0109] MALDI is a traditional method of laser desorption/ionization. In one MALDI method, the sample to be tested is mixed with matrix and deposited directly on a MALDI chip. Depending on the sample being tested, the Flightless I protein being tested is preferably first captured with biospecific (e.g. an antibody) or chromatographic materials coupled to a solid support such as a resin (e.g. in a spin column). Specific affinity materials that may bind the Flightless I protein being detected are described above. After purification on the affinity material, the Flightless I protein is eluted and then detected by MALDI.
[0110] Analysis of proteins by time-of-flight mass spectrometry generates a time-of-flight spectrum. The time-of-flight spectrum ultimately analyzed typically does not represent the signal from a single pulse of ionizing energy against a sample, but rather the sum of signals from a number of pulses. This reduces noise and increases dynamic range. This time-of-flight data is then subject to data processing using specialized software. Data processing typically includes TOF-to-M/Z transformation to generate a mass spectrum, baseline subtraction to eliminate instrument offsets and high frequency noise filtering to reduce high frequency noise.
[0111] Data generated by desorption and detection of Flightless I protein can be analyzed with the use of a programmable digital computer. Data analysis can include steps of determining signal strength of the protein and removing data deviating from a predetermined statistical distribution. For example, the observed peak can be normalized, by calculating the height of the peak relative to a reference. The computer can transform the resulting data into various formats for display. The standard spectrum can be displayed, but in one useful format only the peak height and mass information are retained from the spectrum view, yielding a cleaner image and enabling proteins with nearly identical molecular weights to be more easily seen. In another useful format, two or more spectra are compared, conveniently highlighting Flightless I protein that has varying expression levels between samples. Using any of these formats, one can readily determine whether the Flightless I protein is present in a sample and to what level.
[0112] Other methods which may be employed to determine if the level of Flighltess I protein has decreased in a subject include assays which rely on know protein/protein interactions. These assays may also be used as an indicator of a decrease in activity of Flightless I in a subject. For example, Flightless I protein has an actin-binding domain, and so assays which measure the amount or level of binding between the Flightless I protein and actin will be a reflection of the level and/or activity of Flightless I protein in a particular sample. This level can be compared to the level of binding in a normal control sample. Furthermore, the Flighltess I protein has a leucine-rich repeat which is known to bind proteins such as FLAP-1 (Wilson S A et al., 1998, Nucleic Acids Res., 26: 3460-3467), and Flightless I has been shown to bind directly to the diaphanous-related formins Daam1 and mDia1 (Higashi T et al., 2010, J. Biol. Chem., 285: 16231-16238). Therefore, assays which measure the amount or level of binding between the Flightless I protein and one or more of these other proteins will be a reflection of the level and/or activity of Flightless I protein in a particular sample.
[0113] Further assays which may be used to measure the level of decrease in activity of the Flightless I protein will be dictated by the function of the protein. As indicated above, Flightless I regulates gene transcription and acts as a nuclear receptor co-activator. Therefore, a decrease in the activity of Flighltess I may be assayed according to a concomitant change in gene transcription as mediated by the Flightless I protein. Flightless I also has a major role in wound healing. Accordingly, an assay based on an assessment of wound healing may be used to measure changes in Flightless I activity. Given that Flightless I negatively regulates wound healing through regulating cellular migration and proliferation, cellular adhesion and spreading, assays which measure for changes in cell migration or proliferation, for example, may also be used to measure the activity of the Flightless I protein.
[0114] The terms "treat", "treating" or "treatment," as used herein are to be understood to include within their scope one or more of the following outcomes: (i) inhibiting to some extent the growth of a primary tumour in a subject, including, slowing down and complete growth arrest, and including reducing the growth of the primary tumour after resection; (ii) inhibiting to some extent the growth and formation of one or more secondary tumours in a subject; (iii) reducing the number of tumour cells in a subject; (iv) reducing the size of a tumour in the subject; (v) inhibiting (i.e. reduction, slowing down or complete stopping) of tumor cell infiltration into peripheral organs; (vi) inhibiting (i.e. reduction, slowing down or complete stopping) of metastasis; (vii) improving the life expectancy of a subject as compared to the untreated state; (viii) improving the quality of life of a subject as compared to the untreated state; (ix) alleviating, abating or ameliorating at least one symptom of cancer in a subject; (x) causing regression or remission of cancer in a subject; (xi) relieving a condition in a subject that is caused by cancer; and (xii) stopping symptoms in a subject that are associated with cancer.
[0115] The terms "prevent" or "preventing" as used herein are to be understood to include within their scope inhibiting the formation of a primary tumour in a subject and/or inhibiting the formation of one or more secondary tumours in a subject.
[0116] In one embodiment of the first aspect of the invention, decreasing the expression and/or activity of Flightless I in the subject includes administration to the subject of an effective amount of an agent that decreases the expression and/or activity of Flightless I. The term "effective amount" as used herein is the quantity which, when administered to a subject, improves the prognosis and/or health state of the subject. The amount to be administered to a subject will depend on the particular characteristics of one or more of the level or amount of resistance to the agent in the subject, the tumour type or cancer being inhibited, prevented or treated, the mode of administration of the agent, and the characteristics of the subject, such as general health, other diseases, age, sex, genotype, and body weight. A person skilled in the art will be able to determine appropriate dosages depending on these and other factors. The effective amount of the agent to be used in the various embodiments of the invention is not particularly limited.
[0117] The agent may be any agent that is capable of decreasing the expression and/or activity of Flightless I. For example, the agent may be selected from one or more of the group consisting of a neutralizing antibody (or an antigen binding part thereof), an antisense nucleic acid that binds to Flightless I mRNA and which interferes with translation, a molecule that can specifically repress transcription of endogenous Flightless I mRNA such as a specific DNA or RNA binding protein, a nucleic acid capable of forming a triple helix structure, a small interfering RNA, a microRNA, a short hairpin RNA, a ribozyme that can cleave Flightless I mRNA, an aptamer, and an agent that interacts with or binds to the Flightless I protein (or a regulator of Flightless I) and inhibits its activity, such as a drug, small molecule, protein, polypeptide or oligopeptide.
[0118] In one embodiment, the agent which decreases the expression and/or activity of Flightless I is a Flightless I binding protein. For example, the inventors have established that the Flightless I binding protein, FLAP-1, is capable of decreasing the level of Flightless I protein. However, it is to be understood that any Flightless I binding protein that can decrease the level and/or activity of the Flightless I protein is contemplated by the present invention.
[0119] FLAP-1 is also known as the Leucine Rich Repeat (in FLII) Interacting Protein 1 (LRRFIP1), LRR FLII-interacting protein, leucine-rich repeat flightless-interacting protein 1, FLAP1, FLIIAP1, GCF-2, GC-binding factor 2, HUFI-1, NEDD8-conjugating enzyme, and TAR RNA-interacting protein (TRIP), and is highly conserved across a number of species. The human FLAP-1 gene encodes five isoforms variants, the mRNA and amino acid sequences of which are set out in SEQ ID NOs: 7 to 16, and represented by GenBank Accession Numbers NM_001137550.1 and NP_001131022.1 (variant 1), NM_001137551.1 and NP_001131023.1 (variant 2), NM_001137552.1 and NP_001131024.1 (variant 3), NM_004735.3 and NP_004726.2 (variant 4), and NM_001137553.1 and NP_001131025.1 (variant 5). Further details of the FLAP-1 gene in human and other species may be accessed from the GenBank database at the National Centre for Biotechnology Information (NCBI) (ncbi.nlm.nih.gov). For example, the Gene ID number for human FLAP-1 is 9208.
[0120] Further details regarding the FLAP-1 gene in other species can be found at the UniGene portal of the NCBI (i.e. UniGene Hs. 471779--ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=471779&ALLPROT=1). Alternatively, details of the nucleotide and amino acid sequence for FLAP-1 can be accessed from the UniProt database (uniprot.org) wherein the UniProt ID for human FLAP-I is Q9Y607 (variant 1), B4DPC0 (variant 2), and Q32MZ4 (variants 3 to 5). The contents of the GenBank and UniProt records are incorporated herein by reference.
[0121] In one embodiment, the agent which decreases the expression and/or activity of Flightless I is an antibody, or an antigen binding part thereof, to the Flightless I protein. As would be understood by a person skilled in the art, an "antibody" refers to a polypeptide comprising a framework region from an immunoglobulin gene or fragments thereof that specifically binds and recognizes an antigen, in this case the Flightless I protein. The recognised immunoglobulin genes include the kappa, lambda, alpha, gamma, delta, epsilon, and mu constant region genes, as well as the multitude of immunoglobulin variable region genes. Light chains are classified as either kappa or lambda. Heavy chains are classified as gamma, mu, alpha, delta, or epsilon, which in turn define the immunoglobulin classes, IgG, IgM, IgA, IgD and IgE, respectively.
[0122] Naturally occurring immunoglobulins have a common core structure in which two identical light chains (about 24 kD) and two identical heavy chains (about 55 or 70 kD) form a tetramer. The amino-terminal portion of each chain is known as the variable (V) region and can be distinguished from the more conserved constant (C) regions of the remainder of each chain. Within the variable region of the light chain is a C-terminal portion known as the J region. Within the variable region of the heavy chain, there is a D region in addition to the J region. Most of the amino acid sequence variation in immunoglobulins is confined to three separate locations in the V regions known as hypervariable regions or complementarity determining regions (CDRs) which are directly involved in antigen binding. Proceeding from the amino-terminus, these regions are designated CDRI, CDR2 and CDR3, respectively. The CDRs are held in place by more conserved framework regions (FRs). Proceeding from the amino-terminus, these regions are designated FRI, FR2, FR3, and FR4, respectively. The locations of CDR and FR regions and a numbering system have been defined for example by Kabat et al., 1991 (Sequences of Proteins of Immunological Interest, Fifth Edition, U.S. Department of Health and Human Services, U.S. Government Printing Office).
[0123] The term "antigen binding part" is to be understood to mean the antigen-binding portion of an antibody molecule, including a Fab, Fab', F(ab').sub.2, Fv, a single-chain antibody (scFv), a chimeric antibody, a diabody or any polypeptide that contains at least a portion of an immunoglobulin that is sufficient to confer specific antigen binding, such as a molecule including one or more CDRs (see further detail below).
[0124] Antibodies exist as intact immunoglobulins or as a number of well-characterized fragments produced by digestion with various peptidases. Therefore, for example, pepsin digests an antibody below the disulfide linkages in the hinge region to produce F(ab)'.sub.2, a dimer of Fab which itself is a light chain joined to V.sub.H-C.sub.H1 by a disulfide bond. The F(ab)'.sub.2 may be reduced under mild conditions to break the disulfide linkage in the hinge region, thereby converting the F(ab)'.sub.2 dimer into an Fab' monomer. The Fab' monomer is essentially Fab with part of the hinge region. While various antibody fragments are defined in terms of the digestion of an intact antibody, a person skilled in the art would appreciate that such fragments may be synthesized de novo either chemically or by using recombinant DNA methodology. Therefore, the term antibody, as used herein, also includes antibody fragments either produced by the modification of whole antibodies, or those synthesized de novo using recombinant DNA methodologies (e.g. single chain Fv) or those identified using phage display libraries (see for example McCafferty et al., 1990, Nature 348:552-554).
[0125] A "chimeric antibody" is an antibody molecule in which (a) the constant region, or a portion thereof, is altered, replaced or exchanged so that the antigen binding site (variable region) is linked to a constant region of a different or altered class, effector function and/or species, or an entirely different molecule which confers new properties to the chimeric antibody, e.g. an enzyme, toxin, hormone, growth factor, drug, etc.; or (b) the variable region, or a portion thereof, is altered, replaced or exchanged with a variable region having a different or altered antigen specificity. The chimeric antibodies may be monovalent, divalent, or polyvalent immunoglobulins. For example, a monovalent chimeric antibody is a dimer (HL) formed by a chimeric H chain associated through disulfide bridges with a chimeric L chain, as noted above. A divalent chimeric antibody is a tetramer (H.sub.2 L.sub.2) formed by two HL dimers associated through at least one disulfide bridge. A polyvalent chimeric antibody is based on an aggregation of chains.
[0126] In one embodiment, the antibody may be a humanised antibody. A "humanised" antibody is an antibody that retains the reactivity of a non-human antibody while being less immunogenic in humans. This can be achieved, for example, by retaining the non-human CDR regions and replacing the remaining parts of the antibody with their human counterparts. See for example Morrison et al., 1984, Proc. Natl. Acad. Sci. USA, 81: 6851-6855; Morrison and Oi, 1988, Adv. Immunol., 44: 65-92; Verhoeyen et al., 1988, Science, 239: 1534-1536; Padlan, 1991, Molec. Immun., 28: 489-498; and Padlan, 1994, Molec. Immun., 31: 169-217.
[0127] In one embodiment, the antibody to Flightless I is a neutralising antibody. In one embodiment, the neutralising antibody binds specifically to the leucine rich repeat domain of the Flightless I protein. As would be understood by a person skilled in the art, a neutralising antibody is and antibody that can reduce or neutralise the expression and/or activity of Flightless I. Methods for producing antibodies, including neutralising antibodies, are as described below.
[0128] For the production of antibodies, various hosts including rabbits, rats, goats, mice, humans, and others may be immunised by injection with a Flightless I polypeptide or with any fragment, peptide or oligopeptide thereof which has immunogenic properties. Various adjuvants may be used to increase immunological response and include, but are not limited to, Freund's, mineral gels such as aluminum hydroxide, and surface-active substances such as lysolecithin. Adjuvants used in humans include BCG (bacilli Calmette-Guerin) and Corynebacterium parvum.
[0129] It is preferred that the Flightless I oligopeptides, peptides, or fragments used to induce antibodies have an amino acid sequence consisting of at least 5 amino acids, and, more preferably, of at least 10 amino acids of Flightless I. It is also preferable that these oligopeptides, peptides, or fragments are identical to a portion of the amino acid sequence of the natural protein and contain the entire amino acid sequence of a small, naturally occurring molecule. Short stretches of amino acids from Flightless I may be fused with those of another protein, such as KLH, and antibodies to the chimeric molecule may be produced.
[0130] Monoclonal antibodies to Flightless I may be prepared using any technique which provides for the production of antibody molecules by continuous cell lines in culture. These include, but are not limited to, the hybridoma technique, the human B-cell hybridoma technique, and the EBV-hybridoma technique (for example, see Kohler et al., 1975, Nature 256: 495-497; Kozbor et al., 1985, J. Immunol. Methods 81:31-42; Cote et al., 1983, Proc. Natl. Acad. Sci. USA 80: 2026-2030; and Cole et al., 1984, Mol. Cell Biochem. 62: 109-120).
[0131] Antibodies may also be produced by inducing in vivo production in the lymphocyte population or by screening immunoglobulin libraries or panels of highly specific binding reagents as disclosed in the literature (for example, see Orlandi et al., 1989, Proc. Natl. Acad. Sci. USA 86: 3833-3837; and Winter and Milstein, 1991, Nature 349: 293-299). Antibodies may also be generated using phage display. For example, functional antibody domains are displayed on the surface of phage particles that carry the polynucleotide sequences encoding them. Such phage can be utilized to display antigen-binding domains expressed from a repertoire or combinatorial antibody library (e.g. human or murine). Phage expressing an antigen binding domain that binds Flightless I can be selected or identified with Flightless I, e.g. using labeled Flightless I or a portion thereof. Phage used in these methods are typically filamentous phage including fd and MI 3 binding domains expressed from phage with Fab, Fv or disulfide stabilised Fv antibody domains recombinantly fused to either the phage gene III or gene VIII protein. Examples of phage display methods that can be used to make the antibodies may include those disclosed in Brinkman et al., 1995, J. Immunol. Methods 182: 41-50; Ames et al., 1995, J. Immunol. Methods 184: 177-186; Kettleborough et al., 1994, Eur. J. Immunol. 24: 952-958; Persic et al., 1997, Gene 187: 9-18; Burton et al., 1994, Advances in Immunology 57: 191-280; PCT application number PCT/GB91/01134; PCT publications numbers WO 90/02809; WO 91/10737; WO 92/01047; WO 92/18619; WO 93/11236; WO 95/15982; WO 95/20401; and U.S. Pat. Nos. 5,698,426; 5,223,409; 5,403,484; 5,580,717; 5,427,908; 5,750,753; 5,821,047; 5,571,698; 5,427,908; 5,516,637; 5,780,225; 5,658,727; 5,733,743 and 5,969,108; each of which is incorporated herein by reference in its entirety.
[0132] Techniques which can be used to produce single-chain Fvs and antibodies include those described in U.S. Pat. Nos. 4,946,778 and 5,258,498; Huston et al., 1991, Methods in Enzymology 203: 46-88; Shu et al., 1993, Proc. Natl. Acad. Sci. USA 90: 7995-7999; and Skerra et al., 1988, Science 240: 1038-1040.
[0133] Antibody fragments which contain specific binding sites for Flightless I may be generated using standard techniques known in the art. For example, F(ab')2 fragments may be produced by pepsin digestion of a Flightless I antibody molecule and Fab fragments generated by reducing the disulfide bridges of the F(ab')2 fragments. Alternatively, Fab expression libraries may be constructed to allow rapid and easy identification of monoclonal Fab fragments with the desired specificity (for example, see Huse et al., 1989, Science 246: 1275-1281).
[0134] Various immunoassays may be used for screening to identify antibodies having the desired specificity. Numerous protocols for competitive binding or immunoradiometric assays using either polyclonal or monoclonal antibodies with established specificities are well known in the art. Such immunoassays typically involve the measurement of complex formation between a protein and its specific antibody. A two-site, monoclonal-based immunoassay utilising antibodies reactive to two non-interfering epitopes is preferred, but a competitive binding assay may also be employed.
[0135] In one embodiment, decreasing the expression and/or activity of Flightless I may be achieved by antisense or gene-targeted silencing strategies. Accordingly, such strategies utilise agents including antisense oligonucleotides, antisense RNA, antisense RNA expression vectors, small interfering RNAs (siRNA), microRNAs (miRNAs) and short hairpin RNAs (shRNAs). Still further, catalytic nucleic acid molecules such as aptamers, DNAzymes and ribozymes may be used for gene silencing. These molecules function by cleaving their target mRNA molecule rather than merely binding to it as in traditional antisense approaches.
[0136] An "antisense oligonucleotide" encompassed by the present invention corresponds to an RNA sequence as well as a DNA sequence coding therefor, which is sufficiently complementary to the Flightless I mRNA molecule, for which the antisense RNA is specific, to cause molecular hybridisation between the antisense RNA and the Flightless I mRNA such that translation of the mRNA is inhibited. Such hybridisation can occur under in vitro and in vivo conditions. The antisense molecule must have sufficient complementarity to Flightless I gene so that the antisense RNA can hybridize to the Flightless I gene (or mRNA) and inhibit its expression regardless of whether the action is at the level of splicing, transcription, or translation. In some embodiments, the complementary antisense sequence is about 15 to 30 nucleotides in length, for example, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 nucleotides, or longer or shorter, as desired. Antisense oligonucleotides can include sequences hybridisable to any of several portions of the Flightless I gene, including the coding sequence, 3' or 5' untranslated regions, or intronic sequences.
[0137] The terms "small interfering RNA" and "siRNA" interchangeably refer to short double-stranded RNA oligonucleotides that mediate RNA interference (also referred to as "RNA-mediated interference," or RNAi). RNAi is a highly conserved gene silencing event functioning through targeted destruction of individual mRNA by a homologous double-stranded small interfering RNA (siRNA) (Fire, A et al., 1998, Nature 391: 806-811). Mechanisms for RNAi are reviewed, for example, in Bayne and Allshire, 2005, Trends in Genetics, 21: 370-73; Morris, 2005, Cell Mol. Life Sci., 62: 3057-3066; and Filipowicz, et al., 2005, Current Opinion in Structural Biology, 15: 331-3341.
[0138] For the purposes of the present invention, RNAi can be effected by introduction or expression in the subject of siRNAs specific for Flightless I. The double stranded oligonucleotides used to effect inhibition of expression, at either the transcriptional or translational level, can be of any convenient length. siRNA molecules are typically from about 15 to about 30 nucleic acids in length, for example, about 19-25 nucleic acids in length, for example, about 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30 nucleic acids in length. Optionally the dsRNA oligonucleotides can include 3' overhang ends. Exemplary 2-nucleotide 3' overhangs can be composed of ribonucleotide residues of any type and can be composed of 2'-deoxythymidine resides, which lowers the cost of RNA synthesis and can enhance nuclease resistance of siRNAs in the cell culture medium and within transfected cells (see Elbashir et al., 2001, Nature 411: 494-498).
[0139] Longer dsRNAs of 50, 75, 100 or even 500 base pairs or more can also be utilised. Exemplary concentrations of dsRNAs for effecting Flightless I inhibition are about 0.05 nM, 0.1 nM, 0.5 nM, 1.0 nM, 1.5 nM, 25 nM or 100 nM, although other concentrations can be utilised depending upon the nature of the cells treated and other factors readily discernable to the skilled artisan.
[0140] Exemplary dsRNAs can be synthesized chemically or produced in vitro or in vivo using appropriate expression vectors. Exemplary synthetic RNAs include 21 nucleotide RNAs chemically synthesised using methods known in the art. Synthetic oligonucleotides are preferably deprotected and gel-purified using methods known in the art (see for example Elbashir et al., 2001, Genes Dev. 15: 188-200). Alternatively the dsRNAs can be transcribed from a mammalian expression vector. A single RNA target, placed in both possible orientations downstream of an appropriate promoter for use in mammalian cells, will transcribe both strands of the target to create a dsRNA oligonucleotide of the desired target sequence. Any of the above RNA species should be designed to include a portion of nucleic acid sequence represented in a target nucleic acid.
[0141] The specific sequence utilised in design of the siRNA oligonucleotides can be any contiguous sequence of nucleotides contained within the expressed gene message of the Flightless I target. Programs and algorithms, known in the art, may be used to select appropriate target sequences within the Flightless I gene (for example see the Ambion website at ambion.com). In addition, optimal sequences can be selected utilising programs designed to predict the secondary structure of a specified single stranded nucleic acid sequence and allow selection of those sequences likely to occur in exposed single stranded regions of a folded mRNA. Methods and compositions for designing appropriate siRNA oligonucleotides may be found, for example, in U.S. Pat. No. 6,251,588, the contents of which are incorporated herein by reference.
[0142] As would be understood by a person skilled in the art, ribozymes are enzymatic RNA molecules capable of catalyzing specific cleavage of RNA. The composition of a ribozyme molecule of the present invention should include one or more sequences complementary to Flightless I mRNA, and the well known catalytic sequence responsible for mRNA cleavage or a functionally equivalent sequence (see for example U.S. Pat. No. 5,093,246, which is incorporated herein by reference in its entirety). Ribozyme molecules designed to catalytically cleave Flightless I mRNA transcripts can also be used to prevent translation of Flightless I mRNA. While ribozymes that cleave mRNA at site-specific recognition sequences can be used to destroy target mRNAs, the use of hammerhead ribozymes is preferred. Hammerhead ribozymes cleave mRNAs at locations dictated by flanking regions that form complementary base pairs with the target mRNA. Preferably, the target mRNA has the following sequence of two bases: 5'-UG-3'. The construction and production of hammerhead ribozymes is well known in the art.
[0143] Flightless I targeting ribozymes of the present invention necessarily contain a hybridising region complementary to two regions, each of at least 5 and preferably each 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19 or 20 contiguous nucleotides in length, of the target Flightless I mRNA. In addition, the ribozymes should possess highly specific endoribonuclease activity, which autocatalytically cleaves the Flightless I sense mRNA.
[0144] With regard to antisense, siRNA or ribozyme oligonucleotides, phosphorothioate oligonucleotides can be used. Modifications of the phosphodiester linkage as well as of the heterocycle or the sugar may provide an increase in efficiency. Phophorothioate is used to modify the phosphodiester linkage. An N3'-P5' phosphoramidate linkage has been described as stabilising oligonucleotides to nucleases and increasing the binding to RNA. Peptide nucleic acid (PNA) linkage is a complete replacement of the ribose and phosphodiester backbone and is stable to nucleases, increases the binding affinity to RNA, and does not allow cleavage by RNAse H. Its basic structure is also amenable to modifications that may allow its optimisation as an antisense component. With respect to modifications of the heterocycle, certain heterocycle modifications have proven to augment antisense effects without interfering with RNAse H activity. An example of such modification is C-5 thiazole modification. Finally, modification of the sugar may also be considered. 2'-O-propyl and T-methoxyethoxy ribose modifications stabilize oligonucleotides to nucleases in cell culture and in vivo.
[0145] Inhibitory oligonucleotides can be delivered to a subject or the cell of a subject by direct transfection or transfection and expression via an expression vector. Appropriate expression vectors include mammalian expression vectors and viral vectors, into which has been cloned an inhibitory oligonucleotide with the appropriate regulatory sequences including a promoter to result in expression of the antisense RNA in a host cell. Suitable promoters can be constitutive or development-specific promoters. Transfection delivery can be achieved by liposomal transfection reagents, known in the art (e.g. Xtreme transfection reagent, Roche, Alameda, Calif.; Lipofectamine formulations, Invitrogen, Carlsbad, Calif.). Delivery mediated by cationic liposomes, by retroviral vectors and direct delivery are efficient. Another possible delivery mode is targeting using antibody to cell surface markers for the target cells.
[0146] The agent in the various embodiments of the present invention may also cause an alteration in the intracellular and/or extracellular localisation of Flightless I. For example, the agent may cause re-localisation of Flightless I from the cytoplasm of the cell to the nucleus of the cell, or re-localisation of Flightless I from the nucleus to the cytoplasm.
[0147] As indicated above, the Flightless I gene is evolutionary conserved across a number of species. Accordingly, the term "subject" as used in the present invention should be taken to encompass any subject which expresses the Flightless I gene. In some emdodiments, the subject is a human or animal subject. The animal subject may be a mammal, a primate, a livestock animal (e.g. a horse, a cow, a sheep, a pig, or a goat), a companion animal (e.g. a dog, a cat), a laboratory test animal (e.g. a mouse, a rat, a guinea pig, a bird), an animal of veterinary significance, or an animal of economic significance.
[0148] As indicated above, the present invention provides a method of treating or preventing cancer in a subject. It is to be understood that the type of cancer that can be treated is not to be limited. In other words, any cancer that results from abnormal Flightless I expression and/or activity can be treated or prevented by the method of the first aspect of the invention. Examples of cancers include, but are not limited to, the group consisting of carcinoma, bladder cancer, bone cancer, brain cancer, breast cancer, cervical cancer, colorectal cancer including cancer of the colon, rectum, anus, and appendix, cancer of the oesophagus, Hodgkin's disease, kidney cancer, cancer of the larynx, leukaemia, liver cancer, lung cancer, lymphoma, multiple myeloma, muscular cancer, non-Hodgkin's lymphoma, oral cancer, ovarian cancer, cancer of the pancreas, prostate cancer, sarcoma, skin cancer, stomach cancer, testicular cancer, teratoma, thyroid cancer, and cancer of the uterus.
[0149] In one embodiment, the cancer is selected from the group consisting of skin cancer, colorectal cancer, and lung cancer. In one embodiment, the skin cancer is squamous cell carcinoma.
[0150] The present invention also provides use of an agent that decreases the expression and/or activity of Flightless I in the manufacture of a medicament for treating or preventing cancer in a subject.
[0151] In a second aspect, the present invention provides a method of inhibiting the growth of a cancerous cell, the method including the step of decreasing the expression and/or activity of Flightless I in the cell. In one embodiment, decreasing the expression and/or activity of Flightless I in the cell includes administration to the cell of an effective amount of an agent that decreases the expression and/or activity of Flightless I. Examples of suitable agents have been described in detail above. The meaning of "decreasing the expression and/or activity of Flightless I" has also been described in detail above with respect to the first aspect of the invention.
[0152] The method according to the second aspect of the invention can be practiced in an in vitro or in vivo setting. That is, the cancerous cell may be derived from a cancer cell line, may be derived from a tumour tissue biopsy sample taken from a subject with cancer, or may be a cell present in situ in a subject with cancer. In one embodiment, the cell is selected from the group consisting of a skin cell, a colon cell, and a lung cell. In one embodiment, the skin cell is a squamous cell.
[0153] The present invention also provides use of an agent that decreases the expression and/or activity of Flightless I in the manufacture of a medicament for inhibiting the growth of a cancerous cell.
[0154] In a third aspect, the present invention provides a method of inhibiting formation and/or growth of a tumour in a subject, or of inhibiting tumour invasion and metastasis in a subject, the method including the step of decreasing the expression and/or activity of Flightless I in the subject. In one embodiment, decreasing the expression and/or activity of Flightless I in the subject includes administration to the subject of an effective amount of an agent that decreases the expression and/or activity of Flightless I. Examples of suitable agents have been described in detail above. The meaning of "decreasing the expression and/or activity of Flightless I" has also been described in detail above with respect to the first aspect of the invention.
[0155] As would be understood by a person skilled in the art, "metastasis" is the process whereby tumour cells migrate throughout the body. In order for a tumour to produce metastases it must contain cells of the correct genotype and must be capable of completing a complex series of steps. The steps of tumour cell metastasis include the detachment of tumour cells from the primary neoplasm, invasion into the surrounding stroma, intravasation into the vasculature or lymphatic system, survival in the circulation, extravasation into the new host organ or tissue, and then survival and growth in this new microenvironment.
[0156] With respect to the third aspect of the invention, examples of tumours include, but are not limited to, the group consisting of bladder tumours, bone tumours, brain tumours, breast tumours, cervical tumours, colorectal tumours including tumours of the colon, rectum, anus, and appendix, tumours of the oesophagus, kidney tumours, tumours of the larynx, liver tumours, lung tumours, muscular tumours, oral tumours, ovarian tumours, tumours of the pancreas, prostate tumours, skin tumours, stomach tumours, testicular tumours, thyroid tumours, and tumours of the uterus.
[0157] In one embodiment, the tumour is selected from the group consisting of a skin tumour, a colorectal tumour, and a lung tumour. In one embodiment, the skin tumour is a squamous cell tumour.
[0158] The term "inhibiting" as used in the second and third aspects of the invention is taken to mean a decrease or reduction in the growth of a cancerous cell or tumour when compared to the growth in a control, such as an untreated cell or subject. In one embodiment, growth may be decreased or reduced by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%, relative to an untreated control.
[0159] Inhibition of the growth of a tumour or cancerous cell may be assessed by a range of methods known in the art. For example, for a cancerous cell in vitro, the growth of the cell may be determined by a suitable proliferation assay, or by a method which assess the extent of incorporation of tritiated thymidine into cellular DNA over a given period of time. For a tumour or cancerous cell present in vivo, the growth of the tumour or cell may be determined for example by a suitable imaging method known in the art.
[0160] The present invention also provides use of an agent that decreases the expression and/or activity of Flightless I in the manufacture of a medicament for inhibiting formation and/or growth of a tumour in a subject, or for inhibiting tumour invasion and metastasis in a subject.
[0161] As indicated above, the inventors have determined that the level of Flightless I protein is increased in cancer cells, and that overexpression of Flightless I in vivo leads to tumour development and progression. The differential expression of Flightless I indicates that it is a suitable biomarker which can form the basis of diagnostic and prognostic testing for cancer.
[0162] A biomarker is effectively an organic biomolecule which is differentially present in a sample taken from a subject of one phenotypic status (e.g. having a disease) as compared with another phenotypic status (e.g. not having the disease). A biomarker is differentially present between different phenotypic status groups if the mean or median expression level of the biomarker is calculated to be different (i.e. higher or lower) between the groups. Therefore, biomarkers, alone or in combination, provide an indication that a subject belongs to one phenotypic status or another.
[0163] Accordingly, in a fourth aspect, the present invention provides a method of diagnosing cancer in a subject, the method including the steps of:
[0164] measuring the level of expression and/or activity of Flightless I in the subject;
[0165] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0166] diagnosing cancer in the subject on the basis of the comparison.
[0167] Through the use of a genetically engineered mouse overexpressing Flightless I (Flii.sup.Tg/Tg), the present inventors have determined that Flightless I plays a role in the development of squamous cell tumours.
[0168] Accordingly, in a fifth aspect, the present invention provides a method of determining if a subject is susceptible to developing cancer, the method including the steps of:
[0169] measuring the level of expression and/or activity of Flightless I in the subject;
[0170] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0171] determining if the subject is susceptible to developing cancer on the basis of the comparison.
[0172] The inventors have also established that decreasing expression of Flightless I leads to a decrease in tumour invasion and metastatis. Furthermore, the identification of differential expression of Flightless I in cancer also enables methods for assessing the therapeutic efficacy in a subject of a treatment for the cancer.
[0173] Accordingly, in a sixth aspect, the present invention provides a method of assessing progression of cancer in a subject, the method including the steps of:
[0174] measuring the level of expression and/or activity of Flightless I in the subject;
[0175] comparing the level of expression and/or activity of Flightless I in the subject to a reference level of expression and/or activity of Flightless I; and
[0176] assessing the progression of cancer in the subject on the basis of the comparison.
[0177] Methods and assays which may be used to measure expression and/or activity of Flightless I (and the level thereof) have been described in detail above. The aforementioned methods and assays may measure the level of expression of Flightless I at the transcriptional (mRNA) or translational (protein) stage of expression.
[0178] In the subject, the level of expression and/or activity of Flightless I may be measured directly, or in an alternative embodiment, the level of expression and/or activity of Flightless I may be measured in a sample obtained from a subject. It is to be made clear that the sample obtained from the subject that is analysed by the methods of the present invention may have previously been obtained from the subject, and, for example, stored in an appropriate repository. In this instance, the sample would have been obtained from the subject in isolation of, and therefore separate to, the methods of the present invention.
[0179] The sample which is obtained from the subject may include, but is not limited to, a tissue or tumour biopsy sample, including a corresponding normal tissue sample, blood sample, or a sample derived from blood (for example a serum sample or a plasma sample or a fraction of a blood, serum or plasma sample, blood cells), skin, saliva, buccal swab, stool sample, bladder washing, semen, and urine. In certain circumstances, the sample may be manipulated in any way after procurement, such as by treatment with reagents, solubilization, or enrichment for certain components, such as the relevant protein or polynucleotide under investigation.
[0180] Once the level of expression and/or activity of Flightless I been measured in the subject, or in a sample obtained from the subject, the level of expression and/or activity is compared to a reference level of expression and/or activity for Flightless I. The reference level of expression and/or activity for Flightless I is a level of expression and/or activity that is associated with a known cancer status, i.e. a level of expression and/or activity which is known to be found in a subject not suffering from cancer (a "normal" subject in the context of the present invention). A reference level of expression and/or activity of Flightless I may be derived from at least one normal subject and is preferably derived from an average of normal subjects (e.g. n=2 to 100 or more), wherein the subject or subjects have no prior history of cancer. A reference level of expression and/or activity of Flightless I can also be obtained from one or more normal samples from a subject suspected to have cancer. For example, a reference level of expression and/or activity of Flightless I may be obtained from at least one normal sample and is preferably obtained from an average of normal samples (e.g. n=2 to 100 or more) from the subject.
[0181] As indicated above, the inventors have found that the level of expression of Flightless I is increased in cancer cells and tumours. Accordingly, in an embodiment of the fourth, fifth and sixth aspects of the invention, a level of expression and/or activity of Flightless I in the subject that is higher than the reference level of expression and/or activity for Flightless I is indicative of cancer in the subject, indicates that the subject is susceptible to cancer, or is indicative of the progression of cancer in the subject.
[0182] In some embodiments of the present invention, a level of expression and/or activity of Flightless I is measured at more than one time points. Such "serial" sampling is well suited, for example, to monitoring the progression of cancer. Serial sampling can be performed for any desired timeline, such as monthly, quarterly (i.e. every three months), semi-annually, annually, biennially, or less frequently. The comparison between the measured expression level in the subject and the reference expression level may be carried out each time a new sample is measured, or the data relating to levels may be held for less frequent analysis.
[0183] In one embodiment of the sixth aspect of the invention, the subject is undergoing treatment for the cancer. The treatment may be a conventional therapy such as chemotherapy or radiotherapy, or the treatment may be an alternative therapy. In an alternative embodiment, the subject may not be undergoing treatment at all.
[0184] In some embodiments, the method according to the sixth aspect of the invention may be used to perform clinical trials of a new drug, as well as to monitor the progress of a subject on the drug. Therapy or clinical trials involve administering the drug being tested in a particular regimen. The regimen may involve a single dose of the drug or multiple doses of the drug over time. The doctor or clinical researcher monitors the effect of the drug on the subject over the course of administration. If the drug has a pharmacological impact on the cancer, the level of expression and/or activity of Flightless I will approximate or be identical to the reference level of expression and/or activity of Flightless I. Therefore, the trending of the expression and/or activity levels of Flightless I can be monitored in the subject during the course of treatment. The level of expression and/or activity of Flightless I can be determined using the methods described in detail above. One embodiment of this method involves determining the level of expression and/or activity of Flightless I for at least two different time points during a course of drug therapy, e.g. a first time and a second time, and comparing the change in expression and/or activity level over that time, if any. For example, the level of expression and/or activity of Flightless I can be measured before and after drug administration or at two different time points during drug administration. The effect of therapy is determined based on these comparisons. If a treatment is effective, the level of expression and/or activity of Flightless I will approximate or be identical to the reference level of expression and/or activity of Flightless I, while if treatment is ineffective, the level of expression and/or activity of Flightless I will remain higher than the reference level.
[0185] In a seventh aspect, the present invention provides a method of screening for a candidate therapeutic agent useful for treating or preventing cancer in a subject, the method including the step of assaying the candidate therapeutic agent for activity in decreasing the level of expression and/or activity of Flightless I, wherein an agent that decreases the level of expression and/or activity of Flightless I is a candidate therapeutic agent useful for treating or preventing cancer in the subject. Examples of suitable agents to screen are as described above.
[0186] Screening assays may be performed in vitro and/or in vivo. For example, prospective agents may be screened to identify candidate therapeutic agents for the treatment of cancer in a cell-based assay. In this regard, each prospective agent is incubated with cultured cells (for example cells obtained from a tumour of a subject suffering from cancer, cells obtained from a normal non-affected subject, from normal tissue of a subject suffering from cancer, or from cell lines derived from a normal or affected subject), and modulation of the level of expression and/or activity of Flightless I is measured. In another example, candidate therapeutic agents may be screened in organ culture-based assays. In this regard, each prospective agent is incubated with either a whole organ or a portion of an organ derived from a non-human animal and modulation of the level of expression and/or activity of Flightless I is measured.
[0187] Screening methods may also employ administering prospective therapeutic agents to a subject suffering from cancer. Accordingly, in one embodiment, the method includes measuring a level of expression and/or activity of Flightless I in the subject, wherein the level of expression and/or activity is measured after administration of the candidate therapeutic agent to the subject. The level of expression and/or activity of Flightless I in the subject is then compared to a reference level of expression and/or activity of Flightless I. If the level of expression and/or activity of Flightless I in the subject approximates or is identical to the reference level of expression and/or activity of Flightless I, the candidate therapeutic agent can be said to be useful for the treatment of cancer. The level of expression and/or activity of Flightless I may be measured by the methods described in detail above.
[0188] The methods of the aforementioned aspects of the invention require the level of expression and/or activity of Flightless I to be measured. However, it would be well understood by a person skilled in the art that the level of expression and/or activity of other biomarkers may be measured in addition or concurrently with Flightless I. For example, biomarkers which are known to be differentially expressed in cancer can also be incorporated into the methods of the invention.
[0189] In an eighth aspect, the present invention provides a pharmaceutical composition when used for treating or preventing cancer in a subject, the composition including an effective amount of an agent that decreases expression and/or activity of Flightless I. Examples of suitable agents have been described in detail above. The meaning of "decreasing the expression and/or activity of Flightless I" has also been described in detail above with respect to the first aspect of the invention. Furthermore, the nature of the cancer has also been described in detail above.
[0190] The delivery or administration of the agent in the various embodiments of the present invention may be delivery or administration of the agent alone, or delivery or administration of the agent formulated into a suitable pharmaceutical composition, as referred to above.
[0191] In this regard, the pharmaceutical composition may also include the use of one or more pharmaceutically acceptable additives, including pharmaceutically acceptable salts, amino acids, polypeptides, polymers, solvents, buffers, excipients and bulking agents, taking into consideration the particular physical and chemical characteristics of the agent to be administered.
[0192] The preparation of such pharmaceutical compositions is known in the art, for example as described in Remington's Pharmaceutical Sciences, 18th ed., 1990, Mack Publishing Co., Easton, Pa. and U.S. Pharmacopeia: National Formulary, 1984, Mack Publishing Company, Easton, Pa.
[0193] For example, the agent can be prepared into a variety of pharmaceutical compositions in the form of, for example, an aqueous solution, an oily preparation, a fatty emulsion, an emulsion, a gel, etc., and these preparations can be administered as intramuscular or subcutaneous injection or as injection to an organ, or as an embedded preparation or as a transmucosal preparation through nasal cavity, rectum, uterus, vagina, lung, etc. The composition may be administered in the form of oral preparations (for example solid preparations such as tablets, capsules, granules or powders; liquid preparations such as syrup, emulsions or suspensions). Compositions containing the agent may also contain a preservative, stabiliser, dispersing agent, pH controller or isotonic agent. Examples of suitable preservatives are glycerin, propylene glycol, phenol or benzyl alcohol. Examples of suitable stabilisers are dextran, gelatin, a-tocopherol acetate or alpha-thioglycerin. Examples of suitable dispersing agents include polyoxyethylene (20), sorbitan mono-oleate (Tween 80), sorbitan sesquioleate (Span 30), polyoxyethylene (160) polyoxypropylene (30) glycol (Pluronic F68) or polyoxyethylene hydrogenated castor oil 60. Examples of suitable pH controllers include hydrochloric acid, sodium hydroxide and the like. Examples of suitable isotonic agents are glucose, D-sorbitol or D-mannitol.
[0194] The administration of the agent in the various embodiments of the present invention may also be in the form of a composition containing a pharmaceutically acceptable carrier, diluent, excipient, suspending agent, lubricating agent, adjuvant, vehicle, delivery system, emulsifier, disintegrant, absorbent, preservative, surfactant, colorant, flavorant or sweetener, taking into account the physical and chemical properties of the agent being administered.
[0195] For these purposes, the composition may be administered orally, parenterally, by inhalation spray, adsorption, absorption, topically, rectally, nasally, bucally, vaginally, intraventricularly, via an implanted reservoir in dosage formulations containing conventional non-toxic pharmaceutically-acceptable carriers, or by any other convenient dosage form. The term parenteral as used herein includes subcutaneous, intravenous, intramuscular, intraperitoneal, intrathecal, intraventricular, intrasternal, and intracranial injection or infusion techniques.
[0196] When administered parenterally, the composition will normally be in a unit dosage, sterile injectable form (solution, suspension or emulsion) which is preferably isotonic with the blood of the recipient with a pharmaceutically acceptable carrier. Examples of such sterile injectable forms are sterile injectable aqueous or oleaginous suspensions. These suspensions may be formulated according to techniques known in the art using suitable dispersing or wetting agents and suspending agents. The sterile injectable forms may also be sterile injectable solutions or suspensions in non-toxic parenterally-acceptable diluents or solvents, for example, as solutions in 1,3-butanediol. Among the acceptable vehicles and solvents that may be employed are water, saline, Ringer's solution, dextrose solution, isotonic sodium chloride solution, and Hanks' solution. In addition, sterile, fixed oils are conventionally employed as solvents or suspending mediums. For this purpose, any bland fixed oil may be employed including synthetic mono- or di-glycerides, corn, cottonseed, peanut, and sesame oil. Fatty acids such as ethyl oleate, isopropyl myristate, and oleic acid and its glyceride derivatives, including olive oil and castor oil, especially in their polyoxyethylated versions, are useful in the preparation of injectables. These oil solutions or suspensions may also contain long-chain alcohol diluents or dispersants.
[0197] The carrier may contain minor amounts of additives, such as substances that enhance solubility, isotonicity, and chemical stability, for example anti-oxidants, buffers and preservatives.
[0198] When administered orally, the agent will usually be formulated into unit dosage forms such as tablets, cachets, powder, granules, beads, chewable lozenges, capsules, liquids, aqueous suspensions or solutions, or similar dosage forms, using conventional equipment and techniques known in the art. Such formulations typically include a solid, semisolid, or liquid carrier. Exemplary carriers include lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, mineral oil, cocoa butter, oil of theobroma, alginates, tragacanth, gelatin, syrup, methyl cellulose, polyoxyethylene sorbitan monolaurate, methyl hydroxybenzoate, propyl hydroxybenzoate, talc, magnesium stearate, and the like.
[0199] A tablet may be made by compressing or moulding the agent optionally with one or more accessory ingredients. Compressed tablets may be prepared by compressing, in a suitable machine, the active ingredient in a free-flowing form such as a powder or granules, optionally mixed with a binder, lubricant, inert diluent, surface active, or dispersing agent. Moulded tablets may be made by moulding in a suitable machine, a mixture of the powdered active ingredient and a suitable carrier moistened with an inert liquid diluent.
[0200] The administration of the agent in the various embodiments of the present invention may also utilise controlled release technology. The agent may also be administered as a sustained-release pharmaceutical. To further increase the sustained release effect, the agent may be formulated with additional components such as vegetable oil (for example soybean oil, sesame oil, camellia oil, castor oil, peanut oil, rape seed oil); middle fatty acid triglycerides; fatty acid esters such as ethyl oleate; polysiloxane derivatives; alternatively, water-soluble high molecular weight compounds such as hyaluronic acid or salts thereof (weight average molecular weight: ca. 80,000 to 2,000,000), carboxymethylcellulose sodium (weight average molecular weight: ca. 20,000 to 400,000), hydroxypropylcellulose (viscosity in 2% aqueous solution: 3 to 4,000 cps), atherocollagen (weight average molecular weight: ca. 300,000), polyethylene glycol (weight average molecular weight: ca. 400 to 20,000), polyethylene oxide (weight average molecular weight: ca. 100,000 to 9,000,000), hydroxypropylmethylcellulose (viscosity in 1% aqueous solution: 4 to 100,000 cSt), methylcellulose (viscosity in 2% aqueous solution: 15 to 8,000 cSt), polyvinyl alcohol (viscosity: 2 to 100 cSt), polyvinylpyrrolidone (weight average molecular weight: 25,000 to 1,200,000).
[0201] Alternatively, the agent may be incorporated into a hydrophobic polymer matrix for controlled release over a period of days. The agent may then be moulded into a solid implant, or externally applied patch, suitable for providing efficacious concentrations of the agent over a prolonged period of time without the need for frequent re-dosing. Such controlled release films are well known to the art. Other examples of polymers commonly employed for this purpose that may be used include nondegradable ethylene-vinyl acetate copolymer a degradable lactic acid-glycolic acid copolymers which may be used externally or internally. Certain hydrogels such as poly(hydroxyethylmethacrylate) or poly(vinylalcohol) also may be useful, but for shorter release cycles than the other polymer release systems, such as those mentioned above.
[0202] The carrier may also be a solid biodegradable polymer or mixture of biodegradable polymers with appropriate time release characteristics and release kinetics. The agent may then be moulded into a solid implant suitable for providing efficacious concentrations of the agent over a prolonged period of time without the need for frequent re-dosing. The agent can be incorporated into the biodegradable polymer or polymer mixture in any suitable manner known to one of ordinary skill in the art and may form a homogeneous matrix with the biodegradable polymer, or may be encapsulated in some way within the polymer, or may be moulded into a solid implant.
[0203] For topical administration, the composition of the present invention may be in the form of a solution, spray, lotion, cream (for example a non-ionic cream), gel, paste or ointment. Alternatively, the composition may be delivered via a liposome, nanosome, or nutri-diffuser vehicle.
[0204] A cream is a formulation that contains water and oil and is stabilized with an emulsifier. Lipophilic creams are called water-in-oil emulsions, and hydrophilic creams oil-in-water emulsions. The cream base for water-in-oil emulsions are normally absorption bases such as vaseline, ceresin or lanolin. The bases for oil-in-water emulsions are mono-, di-, and tri-glycerides of fatty acids or fatty alcohols with soaps, alkyl sulphates or alkyl polyglycol ethers as emulsifiers.
[0205] A lotion is an opaque, thin, non-greasy emulsion liquid dosage form for external application to the skin, which generally contains a water-based vehicle with greater than 50% of volatiles and sufficiently low viscosity that it may be delivered by pouring. Lotions are usually hydrophilic, and contain greater than 50% of volatiles as measured by LOD (loss on drying). A lotion tends to evaporate rapidly with a cooling sensation when rubbed onto the skin.
[0206] A paste is an opaque or translucent, viscous, greasy emulsion or suspension semisolid dosage form for external application to the skin, which generally contains greater than 50% of hydrocarbon-based or a polyethylene glycol-based vehicle and less than 20% of volatiles. A paste contains a large proportion (20-50%) of dispersed solids in a fatty or aqueous vehicle. An ointment tends not to evaporate or be absorbed when rubbed onto the skin.
[0207] An ointment is an opaque or translucent, viscous, greasy emulsion or suspension semisolid dosage form for external application to the skin, which generally contains greater than 50% of hydrocarbon-based or a polyethylene glycol-based vehicle and less than 20% of volatiles. An ointment is usually lipophilic, and contains >50% of hydrocarbons or polyethylene glycols as the vehicle and <20% of volatiles as measured by LOD. An ointment tends not to evaporate or be absorbed when rubbed onto the skin.
[0208] A gel is usually a translucent, non-greasy emulsion or suspension semisolid dosage form for external application to the skin, which contains a gelling agent in quantities sufficient to impart a three-dimensional, cross-linked matrix. A gel is usually hydrophilic, and contains sufficient quantities of a gelling agent such as starch, cellulose derivatives, carbomers, magnesium-aluminum silicates, xanthan gum, colloidal silica, aluminium or zinc soaps.
[0209] The composition for topical administration may further include drying agents, anti-foaming agents; buffers, neutralizing agents, agents to adjust pH; colouring agents and decolouring agents; emollients; emulsifying agents, emulsion stabilizers and viscosity builders; humectants; odorants; preservatives, antioxidants, and chemical stabilizers; solvents; and thickening, stiffening, and suspending agents, and a balance of water or solvent.
[0210] It should also be appreciated that other methods of delivery of an agent to modulate the expression and/or activity of Flightless I are contemplated. For example, the agent may be delivered by way of a nucleic acid or vector that allows for expression of the agent in the appropriate target cells. For example, the agent may be delivered by way of a viral vector that causes expression of the agent in target cells.
[0211] In a ninth aspect, the present invention provides a kit for diagnosing cancer in a subject, determining if a subject is susceptible to developing cancer, or assessing progression of cancer in a subject, the kit including means for measuring the level of expression and/or activity of Flightless I in the subject.
[0212] In one embodiment, a level of expression and/or activity of Flightless I in the subject that is higher than a reference level of expression and/or activity for Flightless I diagnoses cancer in the subject, is indicative that the subject is susceptible to developing cancer, or is indicative of progression of cancer in the subject.
[0213] Means and methods for measuring the level of expression and/or activity of Flightless I in the subject according to the ninth aspect of the invention are described in detail above.
[0214] In one embodiment, the kit includes a solid support, such as a chip, sensor, a microtiter plate or a bead or resin having a capture reagent attached thereon, wherein the capture reagent binds Flightless I. Therefore, for example, a kit of the present invention can comprise mass spectrometry probes for SELDI, such as ProteinChip.RTM. arrays, or a versatile fibre-based SPR sensing device. In the case of biospecfic capture reagents, the kit can comprise a solid support with a reactive surface, and a container comprising the biospecific capture reagent.
[0215] In one embodiment, the kit can also include a washing solution or instructions for making a washing solution, in which the combination of the capture reagent and the washing solution allows capture of Flightless I on the solid support for subsequent detection by, for example, mass spectrometry. The kit may include more than one type of adsorbent, each present on a different solid support.
[0216] In some embodiments, such a kit can include instructions for suitable operational parameters in the form of a label or separate insert. For example, the instructions may inform a consumer about how to collect the sample, how to wash the probe or the Flightless Ito be detected.
[0217] In some embodiments, the kit can include one or more containers with samples that represent a reference expression level for Flightless I, and are therefore to be used as a standard for calibration.
[0218] It is to be noted that where a range of values is expressed, it will be clearly understood that this range encompasses the upper and lower limits of the range, and all values in between these limits.
[0219] Furthermore, the term "about" as used in the specification means approximately or nearly and in the context of a numerical value or range set forth herein is meant to encompass variations of +/-10% or less, +/-5% or less, +/-1% or less, or +/-0.1% or less of and from the numerical value or range recited or claimed.
[0220] It will be apparent to the person skilled in the art that while the invention has been described in some detail for the purposes of clarity and understanding, various modifications and alterations to the embodiments and methods described herein may be made without departing from the scope of the inventive concept disclosed in this specification.
[0221] Finally, reference is made to standard textbooks of molecular biology that contain methods for carrying out basic techniques encompassed by the present invention, including DNA restriction and ligation for the generation of the various genetic constructs described herein. See, for example, Sambrook and Russell, Molecular Cloning: A Laboratory Manual (3rd edition), Cold Spring Harbor Laboratory Press, 2001.
[0222] The invention is further illustrated in the following examples. The examples are for the purpose of describing particular embodiments only and are not intended to be limiting with respect to the above description.
EXAMPLE 1
Flightless I Expression in Melanoma Cell Lines
[0223] Epithelial-mesenchymal transition of tumour cells followed by differentiation, invasion, adhesion and migration are crucial in understanding tumour development and progression as well as development of novel therapies. One cytoskeletal protein important in mediating cellular responses is Flightless I. Through its bipartite domain structure, Flightless I is uniquely able to interact with numerous structural and signalling proteins and transduce cell signalling events into a cytoskeleton remodelling, hence linking the signalling pathways with the actin cytoskeleton.
[0224] Considering the role of Flightless I in cellular processes, a number of melanoma cell lines were screened for expression of Flightless I protein. Briefly, human melanoma cell lines NM39, NM170, NM176 and SK-MEL28 were cultured in DMEM:Ham's F12 (3:1) supplemented with 10% FCS, 1% L-glutamine (200 mM) and Ready Mix Plus (0.4 .mu.g/ml hydrocortisone, 5 .mu.g/ml insulin, 10 ng/ml EGF, 5 .mu.g/ml transferrin, 8.4 ng/ml cholera toxin and 13 ng/ml liothyronine).
[0225] Protein lysates from the melanoma cell cultures were prepared and were run following a standard Western Blotting procedure. Protein amounts in each sample were equalised by dilution and heated at 95.degree. C. prior to electrophoresis. Protein fractions were run on a 10% SDS-PAGE (sodium dodecyl sulfate/polyacrylamide) gel consisting of a 10% separating solution (3.35 ml 30% Acrylamide-Bis solution (37.5:1, 2.6% C, BioRad Laboratories, CA, USA), 1.25 ml 3M Tris pH 8.9, 5.25 ml distilled water, 125 .mu.l 10% SDS, 100 .mu.l 10% APS (Ammonium Per-sulfate) (Sigma-Aldrich Chemical Company, Sydney, Australia) and 6.25 .mu.l TEMED (N,N,N',N'-Tetramethylethylene-diamine) (Sigma-Aldrich Chemical Company, Sydney, Australia) and 4% stacking solution (0.5 ml 30% Acrylamide, 0.276 ml 0.5M Tris pH 6.8, 4.104 ml distilled water, 50 .mu.l 10% SDS, 40 .mu.l 10% APS and 4 .mu.l TEMED). Protein fractions were run at 100V for 90 min in the electrophoresis tank. The gel was then transferred onto a 0.2 .mu.m pore nitrocellulose membrane (Advantec MFS Inc, CA, USA) by the process of Wet Transfer using the Bio-Rad Mini-ProteanII Transfer Apparatus (Bio-Rad Laboratories, NSW, Australia) and 1.times. Wet Transfer Buffer--Tobins Buffer (3.3 g Tris, 14.4 g Glycine, 900 ml MilliQ Water, 100 ml Methanol) at 100V for 1 hr. Proteins were then stained in Ponceau Red Stain (Sigma-Aldrich, Sydney, Australia) for 10 min and then destained in MilliQ water and washed in PBS Tween (0.3% Tween/PBS) (50 ml 20.times. PBS, 3 ml Tween, 947 ml MilliQ water). The gel was subjected to Coomassie Staining (Sigma-Aldrich, Sydney, Australia) for 30 min and destained in 40% Methanol, 10% Acetic Acid and 50% MilliQ water overnight to check for the transfer efficiency.
[0226] Membranes were then blocked in 5% skimmed milk in 0.3% Tween/PBS for 1 hr and hybridised with appropriate primary antibody at 1 .mu.g/ml concentration, diluted in blocking buffer prior to addition to the membrane overnight at 4.degree. C. Flightless I anti-rabbit antibodies (sc-30046) were purchased from Santa Cruz Biotechnology (CA, USA), and .beta.-tubulin anti-mouse antibodies (T4026) were purchased from Sigma Aldrich. After blocking, membranes were washed in 5% skim milk, 0.3% Tween/PBS blocking buffer (4.times.10 min), and appropriate secondary antibody conjugated to horse radish peroxidise (HRP) at 1 .mu.g/ml diluted in blocking buffer was applied to membranes in the dark for 1 hr at room temperature. The HRP secondary antibodies used (HRP-conjugated anti-mouse IgG--2017-10 and HRP-conjugated anti-rabbit IgG--2018-05) were obtained from Dako Cytomotion. This was followed by further membrane washes of 4.times.10 min in 0.3% Tween/PBS and signal detection using Super Signal West Femto Maximum Sensitivity Substrate (Pierce Biotechnology, Rockford, USA) and signal capture using GeneSnap analysis software program (Syngene, Maryland, USA). Membranes were stripped by incubation in Stripping Buffer (5 ml 20% SDS, 350 .mu.l 2-Mercaptoethanol (#M7522, Sigma-Aldrich, Sydney, Australia), 6.25 ml 0.5 M Tris/HCl pH 6.7, 38.4 ml MilliQ Water) for 30 min with gentle shaking every 10 min followed by re-probing of membranes with .beta.-tubulin (Sigma-Aldrich, Sydney, Australia) as a loading/transfer control.
[0227] Results of these experiments are shown in FIG. 1. Flightless I is expressed in all melanoma cell lines tested suggesting a potential role for Flightless I in modulating cellular responses during development of melanoma, the most common skin cancer in Australia.
EXAMPLE 2
Analysis of Chemically-Induced Squamous Cell Carcinoma in Flightless I Transgenic Mice
[0228] Using a well described model of chemically induced squamous cell carcinoma (SCC) in mice (a model that results in a 100% incidence of tumours--60% SCC, 40% sarcoma), including Flightless I transgenic mice, the effect of decreased, normal or increased Flightless I levels on development of primary SCC in vivo was investigated. SCC was induced in mice heterozygous for Flightless I (i.e. mice expressing a single copy of Flightless I--Flii.sup.+/-), wild type mice (i.e. mice expressing both copies of Flightless I--WT), and transgenic mice overexpressing Flightless I (i.e. mice expressing extra copies of Flightless I--Flii.sup.Tg/Tg) (n=12) following a single intradermal injection at right flank with 0.1 ml corn oil containing 500 .mu.g of 3-Methylcholanthrene (MCA). The mice were monitored twice weekly for the development of primary tumours including taking photographs of tumours, measuring tumour volume using electronic callipers and clinically scoring the tumour development progression. At end of a 12 week period, mice were euthanized using CO.sub.2 and cervical dislocation and tumour samples collected for histological analysis and cytokeratin staining to confirm tumour identification as SCC.
[0229] Preparation for histological analysis involved fixing the tumour samples in 10% formalin overnight, followed by processing in a Leica TP1020 tissue processor which dehydrated the tissues in a graded alcohol series (70% for 120 mins, 80% for 60 mins, 90% for 105 mins and 100% for 240 mins). They were then cleared in transitional solvent xylene for 180 mins followed by 240 mins of tissue infiltration with paraffin wax. Tissue sections (4 .mu.m) were cut from paraffin-embedded fixed tissue using a Leica RM2235 microtome. Prior to staining, tissue sections were dewaxed by a series of xylene (30 mins) and graduated ethanol washes (bringing sections to water) (100% for 1 min, 70% for 1 min and 30% for 1 min) before further processing. Tissue sections were stained with Haematoxylin and Eosin (H&E). Staining the sections in H&E involved bringing sections to water as mentioned above, followed by staining in Lillie's-Mayer's Haematoxylin for 6 min, "blueing" sections in bicarbonate water for 15 sec, differentiating Haematoxylin in 0.25% Acid Alcohol for 6 sec, staining in alcohol based Eosin stain for 2 min, dehydrating in grated alcohol series (30% for 30 sec, 70% for 30 sec, 100% for 1 min) and clearing in transitional solvent xylene for 2 min before mounting in DePeX mounting medium. H&E stained tissue was examined histologically for the tumour morphology and presence of metastatic nodules.
[0230] Results show that compared to both Flii.sup.+/- and WT mice, a higher percentage of Flii.sup.Tg/Tg mice developed cancerous SCC lesions and these tumours appeared more severe, ulcerated and necrotic (see representative images in FIG. 2). This indicates that Flightless I may directly affect cancer progression. Increased levels of Flightless I also result in development of macroscopically larger SCC tumours (FIG. 3A) and higher incidence of tumours (FIG. 3B). Histological examination showed more invasive well differentiated invading SCC tumours in Flightless I overexpressing mice (FIG. 4). Specifically, compared to the SCC lesions observed in Flii.sup.+/- and WT mice illustrating epidermal hyperplasia and ulcerative lesions, tumours in Flii.sup.Tg/Tg mice appear well differentiated and more invasive with spate clusters of tumour cells and keratin pearls invading deep into the dermis (n=12). These results indicate that Flightless I not only plays an important role in SCC development but may directly influence the progression of tumour growth.
[0231] The origin of SCC tumours in all three genotypes was also examined using pan-cytokeratin staining of invading epidermal cells. Briefly, pan-cytokeratin staining was performed on paraffin embedded SCC tumours of wild-type and Flii.sup.Tg/Tg mice. Sections were first quenched for the endogenous peroxidase activity with 0.3% hydrogen peroxide/methanol for 20 min on ice before blocking the non-specific activity using 3% normal goat serum in PBS for 30 min. Primary antibody goat anti-mouse cytokeratin (Adellab) was applied at a 1:100 dilution in 3% normal goat serum/PBS overnight at 4 degrees. Following 3.times.2 min washes with PBS, species specific biotinylated secondary antibody (Vector Laboratories, CA, USA) was applied at a 1:200 dilution in PBS for 1 hr. This was followed by further 3.times.2 min washes in PBS and application of Vectastain ABC kit following manufacturer's instructions. Following the formation of the Avidin-enzyme complex, sections were washed 3.times.2 min in PBS and Vector DAB (3,3'-diaminobenzidine) substrate kit was applied as per manufacturer's instructions. Sections were counterstained using standard haematoxylin staining for 6 min. Sections were examined using light microscopy for confirmation of cytokeratin positive brown cells of epithelial origin invading the deep dermis. Results are shown in FIG. 5 confirming the epithelial origin of SCC tumours in all three genotypes.
EXAMPLE 3
Flightless I Expression in Skin, Serum and Flightless I Transgenic Mice
[0232] Squamous Cell Carcinoma (SCC) is a particular problem in patients suffering from Epidermolysis bullosa (EB), a skin blistering condition. A 20 year study of EB patients in USA has shown that the cumulative risk of developing SCC and subsequent death in patients with generalized severe Recessive Dystrophic EB (RDEB) at age 55 is greater than 90% and 78% respectively (South A P and O'Toole E A, 2010, Dermatol. Clin., 28: 171-178). In addition, children with RDEB have an increased risk of developing SCC (2.5% by age 12 vs. 1.35-2.7% lifetime risk in general population) (Fine J D et al., 2009, J. Am. Acad. Dermatol., 60: 203-211).
[0233] The histological features between SCC and EB-SCC were examined. Human SCC and EB-SCC samples were obtained and fixed, stained and examined as described in Example 2. The results show that patients suffering from RDEB (n=4) illustrate similar histological features (to SCC) of invasive poorly differentiated aggressive cancers with typical features of dysplastic epithelial cells, epidermal keratinocyte atypia, epidermal hyperkeratotic nodules and membrane rafts invading the dermis (FIGS. 6A-F).
[0234] The expression of Flightless I was next examined in normal skin (n=4), the skin of melanoma (n=4), SCC (n=10), EB-SCC (n=4) and BCC (n=4) patients, and in SCC induced wild-type and Flightless I oberexpressing mice (n=12) using immunohistochemistry. In addition, Flightless I protein levels were quantified in the serum of SCC (n=3), BCC (n=3), melanoma (n=1) patients and a Normal Human Serum (NHS) control. Skin and serum samples were obtained from the RMIT University Tissue Bank containing samples collected from patients, male and female, of all ages. All patients signed the consent form agreeing to donate samples for research purposes and no ethics approval was sought as all tissue was received unidentified for educational and research purposes by the RMIT University. Classifications of melanoma, SCC or BCC were based on clinical presentations and histological presentations. Skin samples were formalin fixed and cut into 4 micron sections as described in Example 2. Skin tissue sections were then subjected to antigen retrieval and immunohistochemistry. This involved the use of a standard antigen retrieval procedure using the primary antibodies described in Example 1, and secondary antibodies as described below. Briefly, tissue sections were dewaxed by a series of xylene changes (30 min) and gradual ethanol washes (100% for 1 min, 70% for 1 min and 30% for 1 min), before being rinsed in 1.times. Phosphate Buffered Saline (PBS) and pre-treated with 250 ml Target Retrieval Solution (TRS) solution (2.8 g Citric Acid, 3.76 g Glycine, 0.372 g EDTA, pH 5.9 in 1 L 1.times. PBS). The sections were then microwaved for 2 min on "high" after which a "ballast" pot of water was added to help absorb some heat and pre-treatment continued for 2.times.5 min with regular "airing" to let the steam out and ensure that the temperature reached 94.degree. C. but not 100.degree. C. Sections were then cooled to 50.degree. C. on ice before they were washed in fresh 1.times. PBS, and then enzyme digestested with 0.0625 g of Trypsin (Sigma-Aldrich, Sydney, Australia) dissolved in 1.times. PBS and pre-warmed to 37.degree. C. Following the 3 min enzyme digestion at 37.degree. C., sections were washed in 1.times. PBS and then incubated for 30 min in NHS blocking solution (3% NHS in 1.times. PBS). Slides were then washed in 1.times. PBS for 2 min and then incubated in primary antibody in a humid airtight box overnight at 4.degree. C. Sections were then washed 3.times.2 min in 1.times. PBS and then incubated in Alexa Flour fluorescent species specific secondary antibody for 1 hr in a dark humid box. The secondary antibody used was Alexa Flour 488 anti-rabbit (A11008) obtained from Invitrogen. Slides were then washed 3.times.2 min in 1.times. PBS to remove any non-specific binding and mounted in a Dako Fluorescent Mounting Medium (DAKO Corporation, Botany, Australia). Slides were stored in the dark at -20.degree. C. Integrated fluorescence intensity was determined using the AnalySIS software package (Soft-Imaging System GmbH, Munster, Germany). Negative controls were included to demonstrate antibody staining specificity. Control samples enderwent the same staining procedure outlined above, except omitting the primary or secondary antibody. All control sections had negligible immunofluorescence.
[0235] Results showed significantly increased expression of Flightless I in both human SCC and EB-SCC lesions compared to normal healthy skin with specific staining in dysplastic hyperproliferative epithelial cells, epidermal hyperkeratotic nodules and in dermal cells of tumour stroma (FIGS. 7A-H). Furthermore, Flightless I expression is increased in both the epidermis and dermis in response to tumour development and is specifically high in invading epithelial tumour cells of melanoma, SCC and BCC patients (FIGS. 8A-D). Finally, tumour sections of Flightless I overexpressing mice have significantly higher Flightless I levels in vivo (FIGS. 9A and B). These results indicate that Flightless I levels are increased in cancer development independent of EB. Furthermore, these results indicate that the increased incidence of SCC development observed in Flightless I overexpressing mice may be attributed to the increased levels of Flightless I in these mice.
[0236] Flightless I protein expression was also examined in the serum of SCC (n=3), BCC (n=3) and melanoma (n=1) patients and a Normal Human Serum (NHS) control as determined by Western Blotting. The procedure used was as described in Example 1 and results of two idependent experiments are shown in FIG. 8E. While Flightless I is expressed in NHS, its level of expression is higher in the serum of melanoma patients and significantly higher in the serum of BCC and SCC patients. Collectively, the data from these experiments suggest a role for Flightless I in different cutaneous tumour pathologies.
[0237] Tissue sections were also examined by immunohistochemistry for the presence of the PCNA protein, a marker of proliferating cells. Antigen retrieval and immunohistochemistry was performed as described above using a PCNA anti-mouse primary antibody (sc-56) obtained from Santa Cruz, and the Alexa Flour 594 anti-mouse secondary antibody. Flightless I was found to collocalize with PCNA in both SCC (n=10) and EB-SCC (n=4) suggesting a role for Flightless I in promoting proliferation of cancer cells (FIGS. 10A-L) and a role in cutaneous cancer pathology. Accordingly, Flightless I may affect epithelial cancer development, growth and metastasis either through a direct effect on cancer cells or through its effects on surrounding tumour stroma.
EXAMPLE 4
Flightless I Expression in SCC Cell Lines and RDEB-SCC Keratinocytes
[0238] Flightless I expression in SCC cell lines and RDEB-SCC keratinocytes was determined using Western analysis and immunohistochemistry, as described in detail above. SCC cell lines (SCC-IC1, SCC-IC2 and MET-1) were cultured as described above in Example 1, while human RDEB-SCC keratinocytes (CC, SBK and GP) were first lysed in 1.times. Triton-lysis buffer (20 mM Tris pH 7.4, 137 mM NaCl, 2 mM EDTA pH 7.4, 1% Triton X-100 and 10% glycerol) containing a protease-inhibitor cocktail (Roche, UK) and 10 mM EDTA prior to Western blotting. The expression of FLAP-1, a protein which binds to Flightless I, was also determined in the SCC cell lines SCC-IC1 and MET-1. The primary antibody used in this experiment was anti-FLAP-1 rabbit polyclonal antibody (ARP59016_P050) purchased from Aviva Systems Biology, and the secondary antibody was polyclonal goat anti-rabbit IgG-HRP (PO488) purchased from Dako An agilent Technologies Company.
[0239] The effect of Flightless I and FLAP-1 expression in response to decreasing Collagen VII (ColVII) levels in the SCC cell lines SCC-IC1 and MET-1 was also determined. Collagen VII is the main constituent of anchoring fibrils holding the skin layers together. Patients suffering from EB have mutations in the ColVII gene resulting in decreased or absent expression of ColVII, subsequent impaired anchoring fibrils and fragile skin. This results in spontaneous wide spread blistering that often leads to development of aggressive SCC. Therefore, this experiment examined the effect of Flighltess I and FLAP-1 on SCC cells that have decreased ColVII levels which would mimic the features seen in EB patients. To effect ColVII knock-down, the SCC-IC1 and MET-1 cell lines were transfected with a SMARTpool of four synthetic siRNAs (Dharmacon, UK), targeting ColVII (#M-011017-00). Transfection was performed according to the manufacturers protocol and optimized for a six-well plate. Briefly, cells were plated at 50% confluency and subjected to transfection the following day using 4 .mu.g of DharmaFECT1 (Dharmacon, UK) transfection reagent and 12.5 nM final concentration of each siRNA. Transfection media were replaced with complete DMEM:Ham's F12 media after 16 hours. Flightless I or FLAP-1 protein expression was analyzed by Western Blotting on cell extracts, as described above. Cells incubated with the transfection reagent only (Mock) as well as cells transfected with a pool of non-targeting siRNAs (siCONTROL Non-Targeting siRNA Pool) were used as negative controls. .beta.-tubulin or GAPDH were used as loading controls.
[0240] The results of these experiments are shown in FIG. 11. Flightless I, but not its binding protein FLAP-1, was expressed in the SCC cell lines and human RDEB-SCC keratinocytes which have different expression levels of ColVII (n=3) (FIG. 11A). In addition, reduction of ColVII significantly increases the expression of Flightless I, but not FLAP-1, in SCC cell lines (FIG. 11B), and Flightless I is specifically expressed by invading human RDEB-SCC keratinocytes (SBK and GP) in a 3D organotypic model of RDEB-SCC (FIG. 11C). This suggests a role for Flightless I in development of SCC in EB patients. These findings also suggest that modulation of Flightless I levels in skin of EB patients may be beneficial in decreasing the onset of SCC lesions or decreasing the growth and metastasis of SCC tumours. This is of vital importance as two thirds of RDEB patients die from aggressive metastatic SCC.
EXAMPLE 5
Decreasing the Level of Flightless I in Epidermal Models of SCC and EB-SCC
[0241] A three dimensional organotypic model of EB-SCC was used to determine the effect that decreasing Flightless I expression had on the invasion properties of SCC tumour cells. Briefly, organotypic cultures on collagen:matrigel gels were performed as previously described (Martins et al., 2009, J. Cell Sci., 122: 1788-1799). Collagen:matrigel gels were prepared by mixing 3.5 volumes of type I collagen (First Link, UK), 3.5 volumes of Matrigel (BD Biosciences, UK), 1 volume of 10.times. DMEM, 1 volume of FCS and 1 volume of DMEM with 10% FCS/HFF (resuspended at a density of 5.times.10.sup.6/ml). One ml of the gel mixture was placed into each well of a 24-well plate and allowed to polymerize at 37.degree. C. for 1 hour. After polymerization, 1 ml of DMEM was added per well and gels were incubated for 18 hours to equilibrate. SBK, GP, MET-1 and/or CC cells were seeded into a plastic ring placed on the top of the gel at a density of 5.times.10.sup.6 per gel. Cells were seeded in media containing rFLAP-1 (100 ng/ml), a Flightless I neutralising antibody (FnAB--100 .mu.g/ml), a dose matched IgG control antibody, or a PBS control. The rFLAP-1 protein was purchased from Abnova Technologies (LRRFIP1 (657-784) Protein--H00009208-Q01). The Flightless I neutralising antibody was made in-house and was an affinity-purified mouse monoclonal anti-Flightless (FnAb) IgG, antibody raised against a Leucine-Rich Repeat (LRR) domain of the Flightless I protein. After 24 hours, the rings were removed and gels were raised to the air-liquid interface on stainless steel grids. Media, containing rFLAP-1, FnAb, IgG control or PBS control, was changed every second day and gels were harvested at day 10, fixed in 4% paraformaldehyde (PFA) and embedded in paraffin. Paraffin sections of invading SCC cells (SBK and GP--for Example 4) were stained for Flightless I expression using the immunohistochemistry protocol described above. Paraffin sections of invading sporadic SCC cells (MET-1) and EB-SCC cells (CC) treated with rFLAP-1, FnAB, IgG control or PBS control were either stained for Haematoxylin and Eosin with depth of invasion measured using AnalySIS software package (Soft-Imaging System GmbH, Munster, Germany), or were used for Flightless and TGF-.beta.1 expression (Example 6) and co-localization analysis as detailed above.
[0242] As shown in FIG. 12A, sporadic SCC (MET-1) and RDEB-SCC (CC) cell invasion properties, in response to decreasing Flightless I levels by means of rFLAP-1, were significantly reduced by 60% and 30% respectively. Furthermore, decreasing Flightless I levels using a Flightless neutralising antibody (FnAb) also significantly reduced the depth of SCC cell invasion of human EB-SCC (26% reduction) or sporadic SCC (64% reduction) keratinocytes (FIG. 12C). These results suggested that Flightless I is a novel target for SCC therapy development and that by reducing Flightless I a decrease in tumour invasion and metastasis may be achieved.
EXAMPLE 6
Effect of Flightless I on TGF-.beta. Signalling
[0243] One possible mechanism behind the effect of Flightless I on SCC cell invasion and tumour growth is the effect of Flightless I on the TGF-.beta. signalling pathway. TGF-.beta. signalling is instrumental in cancer invasion and metastasis and contributes to the development of SCC in patients with EB (Ng Y Z et al., 2012, Cancer Res., 72: 3522-3534). Immunohistochemistry was used according to the methods described above in Example 5 to investigate the effect that decreasing the expression of Flighltess I (by rFLAP-1) had on TGF-.beta.1 expression in 3D organotypic SCC (CC) or RDEB-SCC (MET-1) gels treated with rFLAP-1 or PBS control. Results showed that using the rFLAP-1 treatment, Flightless I expression can be decreased which subsequently reduces TGF-.beta. signalling (FIG. 13A and FIG. 13B). Invading hyperproliferative cancerous cells have a specifically high Flightless I expression. Taken together these results suggest that modulating Flightless I expression may be beneficial in reducing development, growth and invasion of SCC mediated through TGF-.beta. signalling in both SCC and EB-SCC pathology.
EXAMPLE 7
Decreasing the Level of Flightless I in Primary Cutaneous SCC of Wild-Type and Transgenic Mice
[0244] Primary cutaneous SCC was induced in twenty four age and sex matched wild-type Balb/c mice, 4-6 weeks old, with body weights of about 18 grams, by a single intradermal injection of 3-Methylcholanthrene (100 .mu.l corn oil containing 500 .mu.g of MCA) administered to a designated site on the back of each mouse. Mice start developing inflammatory lesions following MCA injection which then progress to ulcerated lesions around week 7 of the trial and necrotic ulcerated nodular SCC by 9 weeks post-SCC induction. Flightless I (Flii) expression/activity was reduced by administrating 100 .mu.l of an in-house produced neutralising antibody to Flightless I (FnAb) (50 .mu.g/ml) or IgG dose matched control antibodies every two weeks including week 0, 2, 4, 6 and 8 using four intradermal injections (25 .mu.l) around the initial MCA injection site or tumour base at later time-points (n=12/treatment). Mice were euthanized at week 10 of the experiment by which time necrotic ulcerated nodular SCC was well developed and samples of non-lesional and lesional tumour skin were collected and either fixed in 10% formalin and processed for histology and immunofluorescence or microdissected and fast frozen for mRNA and protein extraction as previously described. SCC development was analysed macroscopically using electronic callipers in-vivo and ex-vivo following established protocols including microscopic analysis of length of tumour epithelium, cross sectional tumour width and tumour volume.
[0245] The results of these experiments are collectively represented in FIG. 14. As shown in FIG. 14A, the growth of SCC tumours in-vivo was visually reduced by the FnAb when compared to control IgG antibodies. These results demonstrate an effective approach to modulating SCC tumour growth in-vivo using FnAb. Mice treated with FnAb had a significantly decreased tumour volume from week 4 of the experiment (FIG. 14B). Representative images of haematoxylin and eosin stained sections of wild-type mice treated with FnAb or IgG antibodies at week ten of the experiment are shown in FIG. 14C. Microscopic analysis of tumour length (FIG. 14D) and width (FIG. 14E) showed decreased SCC tumour growth and severity in FnAb treated mice compared with the IgG control antibody.
[0246] The same experiment was conducted on Flightless I overexpressing mice (Flii.sup.Tg/Tg) induced for SCC. This is because patients with epidermolysis bullosa, who have a high predisposition to the development of SCC, also have higher expression of Flightless I in blistered skin. As shown in FIG. 15, pre-treatment of Flightless I overexpressing mice with an antibody to Flightless I significantly reduced SCC tumour growth and severity in vivo.
[0247] These studies provide evidence that reducing Flightless I levels in vivo, for example using a neutralising antibody to Flightless I (FnAb), can significantly reduce the growth and severity of primary cutaneous SCC. Furthermore, inhibitors of Flightless I can also be used as a preventative treatment for SCC cancer development in individuals who are at high risk of developing SCC.
EXAMPLE 8
Effect of Flightless I Expression on Other Cancer Types
[0248] To examine the effects of Flighltess I expression on other cancer types, primary and metastatic tumour development was examined in transgenic Flightless mice. CT26 mouse colon cancer cells were used to induce primary and metastatic tumors in Flii.sup.+/- (mice underexpressing Flightless I), WT and (mice overexpressing Flightless I) female mice aged six-eight weeks. To induce primary tumours, cells were injected into the dermis of the flank, specifically 5.times.10.sup.5 cells in an injection volume of 100 .mu.l was used. Primary tumours were measured using electronic callipers daily after injection. Primary tumours were then weighed and fixed for histology at sacrifice of the animals which was 19 days post-injection. For the metastatic model, 3.times.10.sup.5 CT26 cells were injected into the tail vein of the mouse and the lungs were removed at sacrifice (day 14). At this time visible macroscopic metastases werecounted (on the surface of the lung) and lungs were weighed and fixed for histology, as described above. Macroscopic primary tumour size and metastatic tumour numbers were analysed. Both primary and metastatic tumour samples were analysed for expression of .alpha.-SMA indicative of cancer associated fibroblasts surrounding the tumour stoma, using immunohistochemistry as detailed above. Primary lung fibroblasts collected from Flii.sup.+/- and mice were also analysed for expression of .alpha.-SMA using flow cytometry to investigate the effect of Flightless I expression on .alpha.-SMA expression in fibroblasts.
[0249] Results of these experiments are shown in FIGS. 16 to 19. Mice with reduced Flightless I expression (Flii.sup.+/-) showed significantly smaller primary tumours than either control (WT) or Flightless I (FliI.sup.Tg/-) over-expressing mice (p<0.001, n=10) (FIG. 16). Furthermore, mice overexpressing Flightless I showed a significantly greater spread of tumours to metastatic nodules in the lung (p<0.001, n=10) (FIG. 17A). Conversely, mice with reduced Flii expression (FliI.sup.+/- mice) grew smaller tumours (FIG. 17B) and showed fewer metastatic nodules in the lung (FIG. 17A). Control mice of the same genetic background (BALBc) expressing normal levels of Flii (WT), showed a phenotype that was intermediate between the other two mice strains.
[0250] Myofibroblasts (.alpha.-SMA positive cells) in a tumour environment are referred to as cancer associated fibroblasts (CAFs) and compose up to 70-90% of the tumour mass in some cancers (Desmouliere A et al., 2004, Int. J. Dev. Biol., 48: 509-517). Both primary and metastatic tumours in Flightless I overexpressing mice had a significantly higher expression of .alpha.-SMA compared to WT controls (FIG. 18). Higher expression of .alpha.-SMA promotes higher activation of CAFs which through altered secretion of growth factors and cytokines promote tumour proliferation and metastasis (Basset P et al., 1990, Nature 348: 699-704). In addition, .alpha.-SMA expression was higher in unstimulated primary lung fibroblasts extracted from Flightless I overexpressing mice suggesting a more differentiated cell phenotype that could promote more tumour stroma (FIG. 19). Taken together the increased expression of .alpha.-SMA observed in Flightless I overexpressing mice could be one potential mechanism behind increased activation of CAF's and may explain increased primary cancer growth as well as metastasis to the lung.
[0251] Those skilled in the art will appreciate that the invention described herein is susceptible to variations and modifications other than those specifically described. It is to be understood that the invention includes all such variations and modifications. The invention also includes all of the steps, features, compositions and compounds referred to, or indicated in this specification, individually or collectively, and any and all combinations of any two or more of the steps or features.
Sequence CWU
1
1
1614387DNAHomo sapiens 1aactccagca cagggggggc ccgcactcct tggtgcctcc
gcagtcttcg aacagacggg 60gaaactgagg ccctaagagg cctaaagcct acacttcccc
gcggaatgcg gcgggcgcgg 120gcgggttaaa ggggcggggc cggcgctggc ccagcccgcg
gctcccccca gcgccctcgc 180cccggcgctc cctagcccgg cgcggcccgg cagcgagagc
ggcgccatgg aggccaccgg 240ggtgctgccg ttcgtgcgtg gcgtggacct cagcggcaac
gacttcaagg gcggctactt 300ccctgagaat gtcaaggcca tgaccagcct gcggtggctg
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gaacacttgt ctgtgagcca 420caacaacctg accacgcttc atggggagct gtccagcctg
ccatcgctgc gcgccatcgt 480ggcccgagcc aacagtctga agaattccgg agtccccgat
gacatcttca agctagatga 540tctctcagtc ctggacttga gccacaacca gctgacagag
tgcccgcggg agctggagaa 600cgccaagaac atgctggtgc tgaacctcag ccacaacagc
atcgacacca tccccaacca 660gctcttcatc aacctcactg acctactata cctggacctc
agcgagaacc gcctggagag 720cctgcccccg cagatgcgcc gcctggtgca cctgcagacg
ctcgtgctca atggaaaccc 780cctgctgcat gcacagctcc ggcagctccc agcgatgacg
gccctgcaga ccctgcacct 840gcggagcacc cagcgcaccc agagcaacct gcccaccagc
ctggagggtc tgagcaacct 900cgcagacgtg gatctgtcct gcaatgacct gacacgggtg
cccgagtgtc tgtacaccct 960ccccagcctg cgccgcctca acctcagcag caaccagatc
acggagctgt ccctgtgcat 1020agaccagtgg gtgcacgtgg aaactctgaa cctgtcccga
aatcagctca cctcactgcc 1080ctcagccatt tgcaagctga gcaagctgaa gaagctgtac
ctgaattcca acaagctgga 1140ctttgacggg ctgccctcag gcattggcaa gctcaccaac
ctggaagagt tcatggctgc 1200caacaacaac ctggagctgg tccctgaaag tctctgcagg
tgcccaaagc tgaggaaact 1260tgtcctgaac aagaaccacc tggtgaccct cccagaagcc
atccatttcc tgacggagat 1320cgaggtcctg gatgtgcggg agaaccccaa cctggtcatg
ccgcccaagc ccgcagaccg 1380tgccgctgag tggtacaaca tcgacttctc gctgcagaac
cagctgcggc tagcgggtgc 1440ctctcctgct accgtggctg cagctgcagc tgcagggagt
gggcccaagg accctatggc 1500tcgcaagatg cgactgcgga ggcgcaagga ttcagcccag
gatgaccagg ccaagcaggt 1560gctgaagggc atgtcagatg ttgcccagga gaagaacaaa
aagcaggagg agagcgcaga 1620tgcccgggcc cccagcggga aggtgcggcg ttgggaccag
ggcctggaga agccccgcct 1680tgactactcc gagttcttca cggaggacgt gggccagctg
cccggactga ccatctggca 1740gatagagaac ttcgtgcctg tgctggtgga ggaagccttc
cacggcaagt tctacgaggc 1800tgactgctac attgtgctca agacctttct ggatgacagc
ggctccctca actgggagat 1860ctactactgg attggcgggg aggccacact cgacaagaaa
gcttgctctg ccatccacgc 1920tgtcaacttg cgcaactacc tgggtgctga gtgccgcact
gtccgggagg agatgggcga 1980tgagagcgag gagttcctgc aggtgtttga caacgacatc
tcctacattg agggtggaac 2040agccagtggc ttctacactg tggaagacac acactatgtc
accaggatgt atcgtgtgta 2100tgggaaaaag aacatcaagt tggagcctgt gcccctcaag
gggacctctc tggacccaag 2160gtttgttttc ctgctggacc gagggctaga catctacgta
tggcgggggg cccaggccac 2220actgagcagc accaccaagg ccaggctctt tgcagagaaa
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ctcccagagt tctgggaggc 2340actgggtggg gagccctctg agatcaagaa gcacgtgcct
gaagacttct ggccgccgca 2400gcccaagctg tacaaggtgg gcctgggctt gggctacctg
gagctgccac agatcaacta 2460caagctctcc gtggaacata agcagcgtcc caaggtggag
ctgatgccaa gaatgcggct 2520gctgcagagt ctgctggaca cgcgctgcgt gtacattctg
gactgttggt ccgacgtgtt 2580catctggctc ggccgcaagt ccccgcgcct ggtgcgcgct
gccgccctca agctgggtca 2640ggagctgtgc gggatgctgc accggccacg ccatgccacg
gtcagccgca gcctcgaggg 2700caccgaggcg caggtgttca aggccaagtt caagaattgg
gacgatgtgt tgacggtgga 2760ctacacacgc aatgcggagg ccgtgctgca gagcccgggt
ctctccggga aggtgaaacg 2820cgacgccgag aagaaagacc agatgaaggc tgacctcact
gcgcttttcc tgccgcggca 2880gccgcccatg tcgctggccg aggcggagca gctgatggag
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cggctgccgg aagaggagtt 3000tggccacttc tacacgcagg actgctacgt cttcctctgc
aggtactggg tgcctgtgga 3060gtacgaggag gaggaaaaga aggaagacaa ggaggagaag
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gtacgcatga cgcagcagca 3300ggagaacccc aagttcctgt cccatttcaa gaggaagttc
atcatccacc ggggcaagag 3360gaaggcggtc cagggcgccc aacagcccag cctctaccag
atccgcacca acggcagcgc 3420cctctgcacc cggtgcatcc agatcaacac cgactccagc
ctcctcaact ccgagttctg 3480cttcatcctc aaggttccct ttgagagtga ggacaaccag
ggcatcgtgt atgcctgggt 3540gggccgggca tcagaccctg acgaagccaa gttggcagaa
gacatcctga acaccatgtt 3600tgacacctcc tacagcaagc aggttatcaa cgaaggtgag
gagcctgaga acttcttctg 3660ggtgggcatt ggggcacaga agccctatga tgacgatgcc
gagtacatga aacacacacg 3720tctcttccgg tgctccaacg agaagggcta ctttgcagtg
actgagaaat gctccgactt 3780ttgccaagat gacctggcag atgatgacat catgttgcta
gacaatggcc aagaggtcta 3840catgtgggtg gggacccaga ctagccaggt ggagatcaag
ctgagcctga aggcctgcca 3900ggtatatatc cagcacatgc ggtccaagga acatgagcgg
ccgcgccggc tgcgcctggt 3960ccgcaagggc aatgagcagc acgcctttac ccgctgcttc
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tggtgaggaa gaggaagggg 4080cctcatccac tgtctgctag caaagaatgt actcaggtga
caccacctgc tccagccacg 4140tccagtgcca cagtccccag tagcctcaag cagcaccaat
ggggatgacc ctgacaggtg 4200ccctcagggg tctgggaaat ccaactctct ccacagtgtg
agtgcacgtg tgaagccccc 4260tcactcttcc gctagggata aagcagatgt ggatgccctt
taagagatat taaatgcttt 4320tattttcaat attaaaaatc agtattttta atattaaaaa
aaaaaaaaaa aaaaaaaaaa 4380aaaaaaa
438721269PRTHomo sapiens 2Met Glu Ala Thr Gly Val
Leu Pro Phe Val Arg Gly Val Asp Leu Ser 1 5
10 15 Gly Asn Asp Phe Lys Gly Gly Tyr Phe Pro Glu
Asn Val Lys Ala Met 20 25
30 Thr Ser Leu Arg Trp Leu Lys Leu Asn Arg Thr Gly Leu Cys Tyr
Leu 35 40 45 Pro
Glu Glu Leu Ala Ala Leu Gln Lys Leu Glu His Leu Ser Val Ser 50
55 60 His Asn Asn Leu Thr Thr
Leu His Gly Glu Leu Ser Ser Leu Pro Ser 65 70
75 80 Leu Arg Ala Ile Val Ala Arg Ala Asn Ser Leu
Lys Asn Ser Gly Val 85 90
95 Pro Asp Asp Ile Phe Lys Leu Asp Asp Leu Ser Val Leu Asp Leu Ser
100 105 110 His Asn
Gln Leu Thr Glu Cys Pro Arg Glu Leu Glu Asn Ala Lys Asn 115
120 125 Met Leu Val Leu Asn Leu Ser
His Asn Ser Ile Asp Thr Ile Pro Asn 130 135
140 Gln Leu Phe Ile Asn Leu Thr Asp Leu Leu Tyr Leu
Asp Leu Ser Glu 145 150 155
160 Asn Arg Leu Glu Ser Leu Pro Pro Gln Met Arg Arg Leu Val His Leu
165 170 175 Gln Thr Leu
Val Leu Asn Gly Asn Pro Leu Leu His Ala Gln Leu Arg 180
185 190 Gln Leu Pro Ala Met Thr Ala Leu
Gln Thr Leu His Leu Arg Ser Thr 195 200
205 Gln Arg Thr Gln Ser Asn Leu Pro Thr Ser Leu Glu Gly
Leu Ser Asn 210 215 220
Leu Ala Asp Val Asp Leu Ser Cys Asn Asp Leu Thr Arg Val Pro Glu 225
230 235 240 Cys Leu Tyr Thr
Leu Pro Ser Leu Arg Arg Leu Asn Leu Ser Ser Asn 245
250 255 Gln Ile Thr Glu Leu Ser Leu Cys Ile
Asp Gln Trp Val His Val Glu 260 265
270 Thr Leu Asn Leu Ser Arg Asn Gln Leu Thr Ser Leu Pro Ser
Ala Ile 275 280 285
Cys Lys Leu Ser Lys Leu Lys Lys Leu Tyr Leu Asn Ser Asn Lys Leu 290
295 300 Asp Phe Asp Gly Leu
Pro Ser Gly Ile Gly Lys Leu Thr Asn Leu Glu 305 310
315 320 Glu Phe Met Ala Ala Asn Asn Asn Leu Glu
Leu Val Pro Glu Ser Leu 325 330
335 Cys Arg Cys Pro Lys Leu Arg Lys Leu Val Leu Asn Lys Asn His
Leu 340 345 350 Val
Thr Leu Pro Glu Ala Ile His Phe Leu Thr Glu Ile Glu Val Leu 355
360 365 Asp Val Arg Glu Asn Pro
Asn Leu Val Met Pro Pro Lys Pro Ala Asp 370 375
380 Arg Ala Ala Glu Trp Tyr Asn Ile Asp Phe Ser
Leu Gln Asn Gln Leu 385 390 395
400 Arg Leu Ala Gly Ala Ser Pro Ala Thr Val Ala Ala Ala Ala Ala Ala
405 410 415 Gly Ser
Gly Pro Lys Asp Pro Met Ala Arg Lys Met Arg Leu Arg Arg 420
425 430 Arg Lys Asp Ser Ala Gln Asp
Asp Gln Ala Lys Gln Val Leu Lys Gly 435 440
445 Met Ser Asp Val Ala Gln Glu Lys Asn Lys Lys Gln
Glu Glu Ser Ala 450 455 460
Asp Ala Arg Ala Pro Ser Gly Lys Val Arg Arg Trp Asp Gln Gly Leu 465
470 475 480 Glu Lys Pro
Arg Leu Asp Tyr Ser Glu Phe Phe Thr Glu Asp Val Gly 485
490 495 Gln Leu Pro Gly Leu Thr Ile Trp
Gln Ile Glu Asn Phe Val Pro Val 500 505
510 Leu Val Glu Glu Ala Phe His Gly Lys Phe Tyr Glu Ala
Asp Cys Tyr 515 520 525
Ile Val Leu Lys Thr Phe Leu Asp Asp Ser Gly Ser Leu Asn Trp Glu 530
535 540 Ile Tyr Tyr Trp
Ile Gly Gly Glu Ala Thr Leu Asp Lys Lys Ala Cys 545 550
555 560 Ser Ala Ile His Ala Val Asn Leu Arg
Asn Tyr Leu Gly Ala Glu Cys 565 570
575 Arg Thr Val Arg Glu Glu Met Gly Asp Glu Ser Glu Glu Phe
Leu Gln 580 585 590
Val Phe Asp Asn Asp Ile Ser Tyr Ile Glu Gly Gly Thr Ala Ser Gly
595 600 605 Phe Tyr Thr Val
Glu Asp Thr His Tyr Val Thr Arg Met Tyr Arg Val 610
615 620 Tyr Gly Lys Lys Asn Ile Lys Leu
Glu Pro Val Pro Leu Lys Gly Thr 625 630
635 640 Ser Leu Asp Pro Arg Phe Val Phe Leu Leu Asp Arg
Gly Leu Asp Ile 645 650
655 Tyr Val Trp Arg Gly Ala Gln Ala Thr Leu Ser Ser Thr Thr Lys Ala
660 665 670 Arg Leu Phe
Ala Glu Lys Ile Asn Lys Asn Glu Arg Lys Gly Lys Ala 675
680 685 Glu Ile Thr Leu Leu Val Gln Gly
Gln Glu Leu Pro Glu Phe Trp Glu 690 695
700 Ala Leu Gly Gly Glu Pro Ser Glu Ile Lys Lys His Val
Pro Glu Asp 705 710 715
720 Phe Trp Pro Pro Gln Pro Lys Leu Tyr Lys Val Gly Leu Gly Leu Gly
725 730 735 Tyr Leu Glu Leu
Pro Gln Ile Asn Tyr Lys Leu Ser Val Glu His Lys 740
745 750 Gln Arg Pro Lys Val Glu Leu Met Pro
Arg Met Arg Leu Leu Gln Ser 755 760
765 Leu Leu Asp Thr Arg Cys Val Tyr Ile Leu Asp Cys Trp Ser
Asp Val 770 775 780
Phe Ile Trp Leu Gly Arg Lys Ser Pro Arg Leu Val Arg Ala Ala Ala 785
790 795 800 Leu Lys Leu Gly Gln
Glu Leu Cys Gly Met Leu His Arg Pro Arg His 805
810 815 Ala Thr Val Ser Arg Ser Leu Glu Gly Thr
Glu Ala Gln Val Phe Lys 820 825
830 Ala Lys Phe Lys Asn Trp Asp Asp Val Leu Thr Val Asp Tyr Thr
Arg 835 840 845 Asn
Ala Glu Ala Val Leu Gln Ser Pro Gly Leu Ser Gly Lys Val Lys 850
855 860 Arg Asp Ala Glu Lys Lys
Asp Gln Met Lys Ala Asp Leu Thr Ala Leu 865 870
875 880 Phe Leu Pro Arg Gln Pro Pro Met Ser Leu Ala
Glu Ala Glu Gln Leu 885 890
895 Met Glu Glu Trp Asn Glu Asp Leu Asp Gly Met Glu Gly Phe Val Leu
900 905 910 Glu Gly
Lys Lys Phe Ala Arg Leu Pro Glu Glu Glu Phe Gly His Phe 915
920 925 Tyr Thr Gln Asp Cys Tyr Val
Phe Leu Cys Arg Tyr Trp Val Pro Val 930 935
940 Glu Tyr Glu Glu Glu Glu Lys Lys Glu Asp Lys Glu
Glu Lys Ala Glu 945 950 955
960 Gly Lys Glu Gly Glu Glu Ala Thr Ala Glu Ala Glu Glu Lys Gln Pro
965 970 975 Glu Glu Asp
Phe Gln Cys Ile Val Tyr Phe Trp Gln Gly Arg Glu Ala 980
985 990 Ser Asn Met Gly Trp Leu Thr Phe
Thr Phe Ser Leu Gln Lys Lys Phe 995 1000
1005 Glu Ser Leu Phe Pro Gly Lys Leu Glu Val Val
Arg Met Thr Gln 1010 1015 1020
Gln Gln Glu Asn Pro Lys Phe Leu Ser His Phe Lys Arg Lys Phe
1025 1030 1035 Ile Ile His
Arg Gly Lys Arg Lys Ala Val Gln Gly Ala Gln Gln 1040
1045 1050 Pro Ser Leu Tyr Gln Ile Arg Thr
Asn Gly Ser Ala Leu Cys Thr 1055 1060
1065 Arg Cys Ile Gln Ile Asn Thr Asp Ser Ser Leu Leu Asn
Ser Glu 1070 1075 1080
Phe Cys Phe Ile Leu Lys Val Pro Phe Glu Ser Glu Asp Asn Gln 1085
1090 1095 Gly Ile Val Tyr Ala
Trp Val Gly Arg Ala Ser Asp Pro Asp Glu 1100 1105
1110 Ala Lys Leu Ala Glu Asp Ile Leu Asn Thr
Met Phe Asp Thr Ser 1115 1120 1125
Tyr Ser Lys Gln Val Ile Asn Glu Gly Glu Glu Pro Glu Asn Phe
1130 1135 1140 Phe Trp
Val Gly Ile Gly Ala Gln Lys Pro Tyr Asp Asp Asp Ala 1145
1150 1155 Glu Tyr Met Lys His Thr Arg
Leu Phe Arg Cys Ser Asn Glu Lys 1160 1165
1170 Gly Tyr Phe Ala Val Thr Glu Lys Cys Ser Asp Phe
Cys Gln Asp 1175 1180 1185
Asp Leu Ala Asp Asp Asp Ile Met Leu Leu Asp Asn Gly Gln Glu 1190
1195 1200 Val Tyr Met Trp Val
Gly Thr Gln Thr Ser Gln Val Glu Ile Lys 1205 1210
1215 Leu Ser Leu Lys Ala Cys Gln Val Tyr Ile
Gln His Met Arg Ser 1220 1225 1230
Lys Glu His Glu Arg Pro Arg Arg Leu Arg Leu Val Arg Lys Gly
1235 1240 1245 Asn Glu
Gln His Ala Phe Thr Arg Cys Phe His Ala Trp Ser Ala 1250
1255 1260 Phe Cys Lys Ala Leu Ala
1265 34208DNAHomo sapiens 3ttcctgtccc gctcggctcc
aggccctgcg tgtcccaggg actgcggccg gggcggggtg 60gggctctccc ctggccagga
atggacctcc gaggcctccg cccagtgcct ggcggctact 120tccctgagaa tgtcaaggcc
atgaccagcc tgcggtggct gaagctgaac cgcactggcc 180tctgctacct gcccgaggag
ctggccgccc tgcagaagct ggaacacttg tctgtgagcc 240acaacaacct gaccacgctt
catggggagc tgtccagcct gccatcgctg cgcgccatcg 300tggcccgagc caacagtctg
aagaattccg gagtccccga tgacatcttc aagctagatg 360atctctcagt cctggacttg
agccacaacc agctgacaga gtgcccgcgg gagctggaga 420acgccaagaa catgctggtg
ctgaacctca gccacaacag catcgacacc atccccaacc 480agctcttcat caacctcact
gacctactat acctggacct cagcgagaac cgcctggaga 540gcctgccccc gcagatgcgc
cgcctggtgc acctgcagac gctcgtgctc aatggaaacc 600ccctgctgca tgcacagctc
cggcagctcc cagcgatgac ggccctgcag accctgcacc 660tgcggagcac ccagcgcacc
cagagcaacc tgcccaccag cctggagggt ctgagcaacc 720tcgcagacgt ggatctgtcc
tgcaatgacc tgacacgggt gcccgagtgt ctgtacaccc 780tccccagcct gcgccgcctc
aacctcagca gcaaccagat cacggagctg tccctgtgca 840tagaccagtg ggtgcacgtg
gaaactctga acctgtcccg aaatcagctc acctcactgc 900cctcagccat ttgcaagctg
agcaagctga agaagctgta cctgaattcc aacaagctgg 960actttgacgg gctgccctca
ggcattggca agctcaccaa cctggaagag ttcatggctg 1020ccaacaacaa cctggagctg
gtccctgaaa gtctctgcag gtgcccaaag ctgaggaaac 1080ttgtcctgaa caagaaccac
ctggtgaccc tcccagaagc catccatttc ctgacggaga 1140tcgaggtcct ggatgtgcgg
gagaacccca acctggtcat gccgcccaag cccgcagacc 1200gtgccgctga gtggtacaac
atcgacttct cgctgcagaa ccagctgcgg ctagcgggtg 1260cctctcctgc taccgtggct
gcagctgcag ctgcagggag tgggcccaag gaccctatgg 1320ctcgcaagat gcgactgcgg
aggcgcaagg attcagccca ggatgaccag gccaagcagg 1380tgctgaaggg catgtcagat
gttgcccagg agaagaacaa aaagcaggag gagagcgcag 1440atgcccgggc ccccagcggg
aaggtgcggc gttgggacca gggcctggag aagccccgcc 1500ttgactactc cgagttcttc
acggaggacg tgggccagct gcccggactg accatctggc 1560agatagagaa cttcgtgcct
gtgctggtgg aggaagcctt ccacggcaag ttctacgagg 1620ctgactgcta cattgtgctc
aagacctttc tggatgacag cggctccctc aactgggaga 1680tctactactg gattggcggg
gaggccacac tcgacaagaa agcttgctct gccatccacg 1740ctgtcaactt gcgcaactac
ctgggtgctg agtgccgcac tgtccgggag gagatgggcg 1800atgagagcga ggagttcctg
caggtgtttg acaacgacat ctcctacatt gagggtggaa 1860cagccagtgg cttctacact
gtggaagaca cacactatgt caccaggatg tatcgtgtgt 1920atgggaaaaa gaacatcaag
ttggagcctg tgcccctcaa ggggacctct ctggacccaa 1980ggtttgtttt cctgctggac
cgagggctag acatctacgt atggcggggg gcccaggcca 2040cactgagcag caccaccaag
gccaggctct ttgcagagaa aattaacaag aatgagcgga 2100aagggaaggc tgagatcaca
ctgctggtgc agggccagga gctcccagag ttctgggagg 2160cactgggtgg ggagccctct
gagatcaaga agcacgtgcc tgaagacttc tggccgccgc 2220agcccaagct gtacaaggtg
ggcctgggct tgggctacct ggagctgcca cagatcaact 2280acaagctctc cgtggaacat
aagcagcgtc ccaaggtgga gctgatgcca agaatgcggc 2340tgctgcagag tctgctggac
acgcgctgcg tgtacattct ggactgttgg tccgacgtgt 2400tcatctggct cggccgcaag
tccccgcgcc tggtgcgcgc tgccgccctc aagctgggtc 2460aggagctgtg cgggatgctg
caccggccac gccatgccac ggtcagccgc agcctcgagg 2520gcaccgaggc gcaggtgttc
aaggccaagt tcaagaattg ggacgatgtg ttgacggtgg 2580actacacacg caatgcggag
gccgtgctgc agagcccggg tctctccggg aaggtgaaac 2640gcgacgccga gaagaaagac
cagatgaagg ctgacctcac tgcgcttttc ctgccgcggc 2700agccgcccat gtcgctggcc
gaggcggagc agctgatgga ggagtggaac gaagacctag 2760acggcatgga gggtttcgtg
ctggagggca agaagtttgc gcggctgccg gaagaggagt 2820ttggccactt ctacacgcag
gactgctacg tcttcctctg caggtactgg gtgcctgtgg 2880agtacgagga ggaggaaaag
aaggaagaca aggaggagaa ggccgagggc aaagaaggcg 2940aggaagcaac cgctgaggca
gaggagaagc agccagagga ggacttccag tgcatcgtgt 3000acttctggca gggccgtgaa
gcctccaata tgggctggct caccttcacc ttcagcctgc 3060aaaagaagtt cgagagcctc
ttccctggga agctggaggt ggtacgcatg acgcagcagc 3120aggagaaccc caagttcctg
tcccatttca agaggaagtt catcatccac cggggcaaga 3180ggaaggcggt ccagggcgcc
caacagccca gcctctacca gatccgcacc aacggcagcg 3240ccctctgcac ccggtgcatc
cagatcaaca ccgactccag cctcctcaac tccgagttct 3300gcttcatcct caaggttccc
tttgagagtg aggacaacca gggcatcgtg tatgcctggg 3360tgggccgggc atcagaccct
gacgaagcca agttggcaga agacatcctg aacaccatgt 3420ttgacacctc ctacagcaag
caggttatca acgaaggtga ggagcctgag aacttcttct 3480gggtgggcat tggggcacag
aagccctatg atgacgatgc cgagtacatg aaacacacac 3540gtctcttccg gtgctccaac
gagaagggct actttgcagt gactgagaaa tgctccgact 3600tttgccaaga tgacctggca
gatgatgaca tcatgttgct agacaatggc caagaggtct 3660acatgtgggt ggggacccag
actagccagg tggagatcaa gctgagcctg aaggcctgcc 3720aggtatatat ccagcacatg
cggtccaagg aacatgagcg gccgcgccgg ctgcgcctgg 3780tccgcaaggg caatgagcag
cacgccttta cccgctgctt ccacgcctgg agcgccttct 3840gcaaggccct ggcctaagac
aggctggcac agccccaggc ttggtgagga agaggaaggg 3900gcctcatcca ctgtctgcta
gcaaagaatg tactcaggtg acaccacctg ctccagccac 3960gtccagtgcc acagtcccca
gtagcctcaa gcagcaccaa tggggatgac cctgacaggt 4020gccctcaggg gtctgggaaa
tccaactctc tccacagtgt gagtgcacgt gtgaagcccc 4080ctcactcttc cgctagggat
aaagcagatg tggatgccct ttaagagata ttaaatgctt 4140ttattttcaa tattaaaaat
cagtattttt aatattaaaa aaaaaaaaaa aaaaaaaaaa 4200aaaaaaaa
420841258PRTHomo sapiens 4Met
Asp Leu Arg Gly Leu Arg Pro Val Pro Gly Gly Tyr Phe Pro Glu 1
5 10 15 Asn Val Lys Ala Met Thr
Ser Leu Arg Trp Leu Lys Leu Asn Arg Thr 20
25 30 Gly Leu Cys Tyr Leu Pro Glu Glu Leu Ala
Ala Leu Gln Lys Leu Glu 35 40
45 His Leu Ser Val Ser His Asn Asn Leu Thr Thr Leu His Gly
Glu Leu 50 55 60
Ser Ser Leu Pro Ser Leu Arg Ala Ile Val Ala Arg Ala Asn Ser Leu 65
70 75 80 Lys Asn Ser Gly Val
Pro Asp Asp Ile Phe Lys Leu Asp Asp Leu Ser 85
90 95 Val Leu Asp Leu Ser His Asn Gln Leu Thr
Glu Cys Pro Arg Glu Leu 100 105
110 Glu Asn Ala Lys Asn Met Leu Val Leu Asn Leu Ser His Asn Ser
Ile 115 120 125 Asp
Thr Ile Pro Asn Gln Leu Phe Ile Asn Leu Thr Asp Leu Leu Tyr 130
135 140 Leu Asp Leu Ser Glu Asn
Arg Leu Glu Ser Leu Pro Pro Gln Met Arg 145 150
155 160 Arg Leu Val His Leu Gln Thr Leu Val Leu Asn
Gly Asn Pro Leu Leu 165 170
175 His Ala Gln Leu Arg Gln Leu Pro Ala Met Thr Ala Leu Gln Thr Leu
180 185 190 His Leu
Arg Ser Thr Gln Arg Thr Gln Ser Asn Leu Pro Thr Ser Leu 195
200 205 Glu Gly Leu Ser Asn Leu Ala
Asp Val Asp Leu Ser Cys Asn Asp Leu 210 215
220 Thr Arg Val Pro Glu Cys Leu Tyr Thr Leu Pro Ser
Leu Arg Arg Leu 225 230 235
240 Asn Leu Ser Ser Asn Gln Ile Thr Glu Leu Ser Leu Cys Ile Asp Gln
245 250 255 Trp Val His
Val Glu Thr Leu Asn Leu Ser Arg Asn Gln Leu Thr Ser 260
265 270 Leu Pro Ser Ala Ile Cys Lys Leu
Ser Lys Leu Lys Lys Leu Tyr Leu 275 280
285 Asn Ser Asn Lys Leu Asp Phe Asp Gly Leu Pro Ser Gly
Ile Gly Lys 290 295 300
Leu Thr Asn Leu Glu Glu Phe Met Ala Ala Asn Asn Asn Leu Glu Leu 305
310 315 320 Val Pro Glu Ser
Leu Cys Arg Cys Pro Lys Leu Arg Lys Leu Val Leu 325
330 335 Asn Lys Asn His Leu Val Thr Leu Pro
Glu Ala Ile His Phe Leu Thr 340 345
350 Glu Ile Glu Val Leu Asp Val Arg Glu Asn Pro Asn Leu Val
Met Pro 355 360 365
Pro Lys Pro Ala Asp Arg Ala Ala Glu Trp Tyr Asn Ile Asp Phe Ser 370
375 380 Leu Gln Asn Gln Leu
Arg Leu Ala Gly Ala Ser Pro Ala Thr Val Ala 385 390
395 400 Ala Ala Ala Ala Ala Gly Ser Gly Pro Lys
Asp Pro Met Ala Arg Lys 405 410
415 Met Arg Leu Arg Arg Arg Lys Asp Ser Ala Gln Asp Asp Gln Ala
Lys 420 425 430 Gln
Val Leu Lys Gly Met Ser Asp Val Ala Gln Glu Lys Asn Lys Lys 435
440 445 Gln Glu Glu Ser Ala Asp
Ala Arg Ala Pro Ser Gly Lys Val Arg Arg 450 455
460 Trp Asp Gln Gly Leu Glu Lys Pro Arg Leu Asp
Tyr Ser Glu Phe Phe 465 470 475
480 Thr Glu Asp Val Gly Gln Leu Pro Gly Leu Thr Ile Trp Gln Ile Glu
485 490 495 Asn Phe
Val Pro Val Leu Val Glu Glu Ala Phe His Gly Lys Phe Tyr 500
505 510 Glu Ala Asp Cys Tyr Ile Val
Leu Lys Thr Phe Leu Asp Asp Ser Gly 515 520
525 Ser Leu Asn Trp Glu Ile Tyr Tyr Trp Ile Gly Gly
Glu Ala Thr Leu 530 535 540
Asp Lys Lys Ala Cys Ser Ala Ile His Ala Val Asn Leu Arg Asn Tyr 545
550 555 560 Leu Gly Ala
Glu Cys Arg Thr Val Arg Glu Glu Met Gly Asp Glu Ser 565
570 575 Glu Glu Phe Leu Gln Val Phe Asp
Asn Asp Ile Ser Tyr Ile Glu Gly 580 585
590 Gly Thr Ala Ser Gly Phe Tyr Thr Val Glu Asp Thr His
Tyr Val Thr 595 600 605
Arg Met Tyr Arg Val Tyr Gly Lys Lys Asn Ile Lys Leu Glu Pro Val 610
615 620 Pro Leu Lys Gly
Thr Ser Leu Asp Pro Arg Phe Val Phe Leu Leu Asp 625 630
635 640 Arg Gly Leu Asp Ile Tyr Val Trp Arg
Gly Ala Gln Ala Thr Leu Ser 645 650
655 Ser Thr Thr Lys Ala Arg Leu Phe Ala Glu Lys Ile Asn Lys
Asn Glu 660 665 670
Arg Lys Gly Lys Ala Glu Ile Thr Leu Leu Val Gln Gly Gln Glu Leu
675 680 685 Pro Glu Phe Trp
Glu Ala Leu Gly Gly Glu Pro Ser Glu Ile Lys Lys 690
695 700 His Val Pro Glu Asp Phe Trp Pro
Pro Gln Pro Lys Leu Tyr Lys Val 705 710
715 720 Gly Leu Gly Leu Gly Tyr Leu Glu Leu Pro Gln Ile
Asn Tyr Lys Leu 725 730
735 Ser Val Glu His Lys Gln Arg Pro Lys Val Glu Leu Met Pro Arg Met
740 745 750 Arg Leu Leu
Gln Ser Leu Leu Asp Thr Arg Cys Val Tyr Ile Leu Asp 755
760 765 Cys Trp Ser Asp Val Phe Ile Trp
Leu Gly Arg Lys Ser Pro Arg Leu 770 775
780 Val Arg Ala Ala Ala Leu Lys Leu Gly Gln Glu Leu Cys
Gly Met Leu 785 790 795
800 His Arg Pro Arg His Ala Thr Val Ser Arg Ser Leu Glu Gly Thr Glu
805 810 815 Ala Gln Val Phe
Lys Ala Lys Phe Lys Asn Trp Asp Asp Val Leu Thr 820
825 830 Val Asp Tyr Thr Arg Asn Ala Glu Ala
Val Leu Gln Ser Pro Gly Leu 835 840
845 Ser Gly Lys Val Lys Arg Asp Ala Glu Lys Lys Asp Gln Met
Lys Ala 850 855 860
Asp Leu Thr Ala Leu Phe Leu Pro Arg Gln Pro Pro Met Ser Leu Ala 865
870 875 880 Glu Ala Glu Gln Leu
Met Glu Glu Trp Asn Glu Asp Leu Asp Gly Met 885
890 895 Glu Gly Phe Val Leu Glu Gly Lys Lys Phe
Ala Arg Leu Pro Glu Glu 900 905
910 Glu Phe Gly His Phe Tyr Thr Gln Asp Cys Tyr Val Phe Leu Cys
Arg 915 920 925 Tyr
Trp Val Pro Val Glu Tyr Glu Glu Glu Glu Lys Lys Glu Asp Lys 930
935 940 Glu Glu Lys Ala Glu Gly
Lys Glu Gly Glu Glu Ala Thr Ala Glu Ala 945 950
955 960 Glu Glu Lys Gln Pro Glu Glu Asp Phe Gln Cys
Ile Val Tyr Phe Trp 965 970
975 Gln Gly Arg Glu Ala Ser Asn Met Gly Trp Leu Thr Phe Thr Phe Ser
980 985 990 Leu Gln
Lys Lys Phe Glu Ser Leu Phe Pro Gly Lys Leu Glu Val Val 995
1000 1005 Arg Met Thr Gln Gln
Gln Glu Asn Pro Lys Phe Leu Ser His Phe 1010 1015
1020 Lys Arg Lys Phe Ile Ile His Arg Gly Lys
Arg Lys Ala Val Gln 1025 1030 1035
Gly Ala Gln Gln Pro Ser Leu Tyr Gln Ile Arg Thr Asn Gly Ser
1040 1045 1050 Ala Leu
Cys Thr Arg Cys Ile Gln Ile Asn Thr Asp Ser Ser Leu 1055
1060 1065 Leu Asn Ser Glu Phe Cys Phe
Ile Leu Lys Val Pro Phe Glu Ser 1070 1075
1080 Glu Asp Asn Gln Gly Ile Val Tyr Ala Trp Val Gly
Arg Ala Ser 1085 1090 1095
Asp Pro Asp Glu Ala Lys Leu Ala Glu Asp Ile Leu Asn Thr Met 1100
1105 1110 Phe Asp Thr Ser Tyr
Ser Lys Gln Val Ile Asn Glu Gly Glu Glu 1115 1120
1125 Pro Glu Asn Phe Phe Trp Val Gly Ile Gly
Ala Gln Lys Pro Tyr 1130 1135 1140
Asp Asp Asp Ala Glu Tyr Met Lys His Thr Arg Leu Phe Arg Cys
1145 1150 1155 Ser Asn
Glu Lys Gly Tyr Phe Ala Val Thr Glu Lys Cys Ser Asp 1160
1165 1170 Phe Cys Gln Asp Asp Leu Ala
Asp Asp Asp Ile Met Leu Leu Asp 1175 1180
1185 Asn Gly Gln Glu Val Tyr Met Trp Val Gly Thr Gln
Thr Ser Gln 1190 1195 1200
Val Glu Ile Lys Leu Ser Leu Lys Ala Cys Gln Val Tyr Ile Gln 1205
1210 1215 His Met Arg Ser Lys
Glu His Glu Arg Pro Arg Arg Leu Arg Leu 1220 1225
1230 Val Arg Lys Gly Asn Glu Gln His Ala Phe
Thr Arg Cys Phe His 1235 1240 1245
Ala Trp Ser Ala Phe Cys Lys Ala Leu Ala 1250
1255 54222DNAHomo sapiens 5aactccagca cagggggggc
ccgcactcct tggtgcctcc gcagtcttcg aacagacggg 60gaaactgagg ccctaagagg
cctaaagcct acacttcccc gcggaatgcg gcgggcgcgg 120gcgggttaaa ggggcggggc
cggcgctggc ccagcccgcg gctcccccca gcgccctcgc 180cccggcgctc cctagcccgg
cgcggcccgg cagcgagagc ggcgccatgg aggccaccgg 240ggtgctgccg ttcgtgcgtg
gcgtggacct cagcggcaac gacttcaagg gcggctactt 300ccctgagaat gtcaaggcca
tgaccagcct gcggtggctg aagctgaacc gcactggcct 360ctgctacctg cccgaggagc
tggccgccct gcagaagctg gaacacttgt ctgtgagcca 420caacaacctg accacgcttc
atggggagct gtccagcctg ccatcgctgc gcgccatcgt 480ggcccgagcc aacagtctga
agaattccgg agtccccgat gacatcttca agctagatga 540tctctcagtc ctggacttga
gccacaacca gctgacagag tgcccgcggg agctggagaa 600cgccaagaac atgctggtgc
tgaacctcag ccacaacagg cagctcccag cgatgacggc 660cctgcagacc ctgcacctgc
ggagcaccca gcgcacccag agcaacctgc ccaccagcct 720ggagggtctg agcaacctcg
cagacgtgga tctgtcctgc aatgacctga cacgggtgcc 780cgagtgtctg tacaccctcc
ccagcctgcg ccgcctcaac ctcagcagca accagatcac 840ggagctgtcc ctgtgcatag
accagtgggt gcacgtggaa actctgaacc tgtcccgaaa 900tcagctcacc tcactgccct
cagccatttg caagctgagc aagctgaaga agctgtacct 960gaattccaac aagctggact
ttgacgggct gccctcaggc attggcaagc tcaccaacct 1020ggaagagttc atggctgcca
acaacaacct ggagctggtc cctgaaagtc tctgcaggtg 1080cccaaagctg aggaaacttg
tcctgaacaa gaaccacctg gtgaccctcc cagaagccat 1140ccatttcctg acggagatcg
aggtcctgga tgtgcgggag aaccccaacc tggtcatgcc 1200gcccaagccc gcagaccgtg
ccgctgagtg gtacaacatc gacttctcgc tgcagaacca 1260gctgcggcta gcgggtgcct
ctcctgctac cgtggctgca gctgcagctg ggagtgggcc 1320caaggaccct atggctcgca
agatgcgact gcggaggcgc aaggattcag cccaggatga 1380ccaggccaag caggtgctga
agggcatgtc agatgttgcc caggagaaga acaaaaagca 1440ggaggagagc gcagatgccc
gggcccccag cgggaaggtg cggcgttggg accagggcct 1500ggagaagccc cgccttgact
actccgagtt cttcacggag gacgtgggcc agctgcccgg 1560actgaccatc tggcagatag
agaacttcgt gcctgtgctg gtggaggaag ccttccacgg 1620caagttctac gaggctgact
gctacattgt gctcaagacc tttctggatg acagcggctc 1680cctcaactgg gagatctact
actggattgg cggggaggcc acactcgaca agaaagcttg 1740ctctgccatc cacgctgtca
acttgcgcaa ctacctgggt gctgagtgcc gcactgtccg 1800ggaggagatg ggcgatgaga
gcgaggagtt cctgcaggtg tttgacaacg acatctccta 1860cattgagggt ggaacagcca
gtggcttcta cactgtggaa gacacacact atgtcaccag 1920gatgtatcgt gtgtatggga
aaaagaacat caagttggag cctgtgcccc tcaaggggac 1980ctctctggac ccaaggtttg
ttttcctgct ggaccgaggg ctagacatct acgtatggcg 2040gggggcccag gccacactga
gcagcaccac caaggccagg ctctttgcag agaaaattaa 2100caagaatgag cggaaaggga
aggctgagat cacactgctg gtgcagggcc aggagctccc 2160agagttctgg gaggcactgg
gtggggagcc ctctgagatc aagaagcacg tgcctgaaga 2220cttctggccg ccgcagccca
agctgtacaa ggtgggcctg ggcttgggct acctggagct 2280gccacagatc aactacaagc
tctccgtgga acataagcag cgtcccaagg tggagctgat 2340gccaagaatg cggctgctgc
agagtctgct ggacacgcgc tgcgtgtaca ttctggactg 2400ttggtccgac gtgttcatct
ggctcggccg caagtccccg cgcctggtgc gcgctgccgc 2460cctcaagctg ggtcaggagc
tgtgcgggat gctgcaccgg ccacgccatg ccacggtcag 2520ccgcagcctc gagggcaccg
aggcgcaggt gttcaaggcc aagttcaaga attgggacga 2580tgtgttgacg gtggactaca
cacgcaatgc ggaggccgtg ctgcagagcc cgggtctctc 2640cgggaaggtg aaacgcgacg
ccgagaagaa agaccagatg aaggctgacc tcactgcgct 2700tttcctgccg cggcagccgc
ccatgtcgct ggccgaggcg gagcagctga tggaggagtg 2760gaacgaagac ctagacggca
tggagggttt cgtgctggag ggcaagaagt ttgcgcggct 2820gccggaagag gagtttggcc
acttctacac gcaggactgc tacgtcttcc tctgcaggta 2880ctgggtgcct gtggagtacg
aggaggagga aaagaaggaa gacaaggagg agaaggccga 2940gggcaaagaa ggcgaggaag
caaccgctga ggcagaggag aagcagccag aggaggactt 3000ccagtgcatc gtgtacttct
ggcagggccg tgaagcctcc aatatgggct ggctcacctt 3060caccttcagc ctgcaaaaga
agttcgagag cctcttccct gggaagctgg aggtggtacg 3120catgacgcag cagcaggaga
accccaagtt cctgtcccat ttcaagagga agttcatcat 3180ccaccggggc aagaggaagg
cggtccaggg cgcccaacag cccagcctct accagatccg 3240caccaacggc agcgccctct
gcacccggtg catccagatc aacaccgact ccagcctcct 3300caactccgag ttctgcttca
tcctcaaggt tccctttgag agtgaggaca accagggcat 3360cgtgtatgcc tgggtgggcc
gggcatcaga ccctgacgaa gccaagttgg cagaagacat 3420cctgaacacc atgtttgaca
cctcctacag caagcaggtt atcaacgaag gtgaggagcc 3480tgagaacttc ttctgggtgg
gcattggggc acagaagccc tatgatgacg atgccgagta 3540catgaaacac acacgtctct
tccggtgctc caacgagaag ggctactttg cagtgactga 3600gaaatgctcc gacttttgcc
aagatgacct ggcagatgat gacatcatgt tgctagacaa 3660tggccaagag gtctacatgt
gggtggggac ccagactagc caggtggaga tcaagctgag 3720cctgaaggcc tgccaggtat
atatccagca catgcggtcc aaggaacatg agcggccgcg 3780ccggctgcgc ctggtccgca
agggcaatga gcagcacgcc tttacccgct gcttccacgc 3840ctggagcgcc ttctgcaagg
ccctggccta agacaggctg gcacagcccc aggcttggtg 3900aggaagagga aggggcctca
tccactgtct gctagcaaag aatgtactca ggtgacacca 3960cctgctccag ccacgtccag
tgccacagtc cccagtagcc tcaagcagca ccaatgggga 4020tgaccctgac aggtgccctc
aggggtctgg gaaatccaac tctctccaca gtgtgagtgc 4080acgtgtgaag ccccctcact
cttccgctag ggataaagca gatgtggatg ccctttaaga 4140gatattaaat gcttttattt
tcaatattaa aaatcagtat ttttaatatt aaaaaaaaaa 4200aaaaaaaaaa aaaaaaaaaa
aa 422261214PRTHomo sapiens
6Met Glu Ala Thr Gly Val Leu Pro Phe Val Arg Gly Val Asp Leu Ser 1
5 10 15 Gly Asn Asp Phe
Lys Gly Gly Tyr Phe Pro Glu Asn Val Lys Ala Met 20
25 30 Thr Ser Leu Arg Trp Leu Lys Leu Asn
Arg Thr Gly Leu Cys Tyr Leu 35 40
45 Pro Glu Glu Leu Ala Ala Leu Gln Lys Leu Glu His Leu Ser
Val Ser 50 55 60
His Asn Asn Leu Thr Thr Leu His Gly Glu Leu Ser Ser Leu Pro Ser 65
70 75 80 Leu Arg Ala Ile Val
Ala Arg Ala Asn Ser Leu Lys Asn Ser Gly Val 85
90 95 Pro Asp Asp Ile Phe Lys Leu Asp Asp Leu
Ser Val Leu Asp Leu Ser 100 105
110 His Asn Gln Leu Thr Glu Cys Pro Arg Glu Leu Glu Asn Ala Lys
Asn 115 120 125 Met
Leu Val Leu Asn Leu Ser His Asn Arg Gln Leu Pro Ala Met Thr 130
135 140 Ala Leu Gln Thr Leu His
Leu Arg Ser Thr Gln Arg Thr Gln Ser Asn 145 150
155 160 Leu Pro Thr Ser Leu Glu Gly Leu Ser Asn Leu
Ala Asp Val Asp Leu 165 170
175 Ser Cys Asn Asp Leu Thr Arg Val Pro Glu Cys Leu Tyr Thr Leu Pro
180 185 190 Ser Leu
Arg Arg Leu Asn Leu Ser Ser Asn Gln Ile Thr Glu Leu Ser 195
200 205 Leu Cys Ile Asp Gln Trp Val
His Val Glu Thr Leu Asn Leu Ser Arg 210 215
220 Asn Gln Leu Thr Ser Leu Pro Ser Ala Ile Cys Lys
Leu Ser Lys Leu 225 230 235
240 Lys Lys Leu Tyr Leu Asn Ser Asn Lys Leu Asp Phe Asp Gly Leu Pro
245 250 255 Ser Gly Ile
Gly Lys Leu Thr Asn Leu Glu Glu Phe Met Ala Ala Asn 260
265 270 Asn Asn Leu Glu Leu Val Pro Glu
Ser Leu Cys Arg Cys Pro Lys Leu 275 280
285 Arg Lys Leu Val Leu Asn Lys Asn His Leu Val Thr Leu
Pro Glu Ala 290 295 300
Ile His Phe Leu Thr Glu Ile Glu Val Leu Asp Val Arg Glu Asn Pro 305
310 315 320 Asn Leu Val Met
Pro Pro Lys Pro Ala Asp Arg Ala Ala Glu Trp Tyr 325
330 335 Asn Ile Asp Phe Ser Leu Gln Asn Gln
Leu Arg Leu Ala Gly Ala Ser 340 345
350 Pro Ala Thr Val Ala Ala Ala Ala Ala Gly Ser Gly Pro Lys
Asp Pro 355 360 365
Met Ala Arg Lys Met Arg Leu Arg Arg Arg Lys Asp Ser Ala Gln Asp 370
375 380 Asp Gln Ala Lys Gln
Val Leu Lys Gly Met Ser Asp Val Ala Gln Glu 385 390
395 400 Lys Asn Lys Lys Gln Glu Glu Ser Ala Asp
Ala Arg Ala Pro Ser Gly 405 410
415 Lys Val Arg Arg Trp Asp Gln Gly Leu Glu Lys Pro Arg Leu Asp
Tyr 420 425 430 Ser
Glu Phe Phe Thr Glu Asp Val Gly Gln Leu Pro Gly Leu Thr Ile 435
440 445 Trp Gln Ile Glu Asn Phe
Val Pro Val Leu Val Glu Glu Ala Phe His 450 455
460 Gly Lys Phe Tyr Glu Ala Asp Cys Tyr Ile Val
Leu Lys Thr Phe Leu 465 470 475
480 Asp Asp Ser Gly Ser Leu Asn Trp Glu Ile Tyr Tyr Trp Ile Gly Gly
485 490 495 Glu Ala
Thr Leu Asp Lys Lys Ala Cys Ser Ala Ile His Ala Val Asn 500
505 510 Leu Arg Asn Tyr Leu Gly Ala
Glu Cys Arg Thr Val Arg Glu Glu Met 515 520
525 Gly Asp Glu Ser Glu Glu Phe Leu Gln Val Phe Asp
Asn Asp Ile Ser 530 535 540
Tyr Ile Glu Gly Gly Thr Ala Ser Gly Phe Tyr Thr Val Glu Asp Thr 545
550 555 560 His Tyr Val
Thr Arg Met Tyr Arg Val Tyr Gly Lys Lys Asn Ile Lys 565
570 575 Leu Glu Pro Val Pro Leu Lys Gly
Thr Ser Leu Asp Pro Arg Phe Val 580 585
590 Phe Leu Leu Asp Arg Gly Leu Asp Ile Tyr Val Trp Arg
Gly Ala Gln 595 600 605
Ala Thr Leu Ser Ser Thr Thr Lys Ala Arg Leu Phe Ala Glu Lys Ile 610
615 620 Asn Lys Asn Glu
Arg Lys Gly Lys Ala Glu Ile Thr Leu Leu Val Gln 625 630
635 640 Gly Gln Glu Leu Pro Glu Phe Trp Glu
Ala Leu Gly Gly Glu Pro Ser 645 650
655 Glu Ile Lys Lys His Val Pro Glu Asp Phe Trp Pro Pro Gln
Pro Lys 660 665 670
Leu Tyr Lys Val Gly Leu Gly Leu Gly Tyr Leu Glu Leu Pro Gln Ile
675 680 685 Asn Tyr Lys Leu
Ser Val Glu His Lys Gln Arg Pro Lys Val Glu Leu 690
695 700 Met Pro Arg Met Arg Leu Leu Gln
Ser Leu Leu Asp Thr Arg Cys Val 705 710
715 720 Tyr Ile Leu Asp Cys Trp Ser Asp Val Phe Ile Trp
Leu Gly Arg Lys 725 730
735 Ser Pro Arg Leu Val Arg Ala Ala Ala Leu Lys Leu Gly Gln Glu Leu
740 745 750 Cys Gly Met
Leu His Arg Pro Arg His Ala Thr Val Ser Arg Ser Leu 755
760 765 Glu Gly Thr Glu Ala Gln Val Phe
Lys Ala Lys Phe Lys Asn Trp Asp 770 775
780 Asp Val Leu Thr Val Asp Tyr Thr Arg Asn Ala Glu Ala
Val Leu Gln 785 790 795
800 Ser Pro Gly Leu Ser Gly Lys Val Lys Arg Asp Ala Glu Lys Lys Asp
805 810 815 Gln Met Lys Ala
Asp Leu Thr Ala Leu Phe Leu Pro Arg Gln Pro Pro 820
825 830 Met Ser Leu Ala Glu Ala Glu Gln Leu
Met Glu Glu Trp Asn Glu Asp 835 840
845 Leu Asp Gly Met Glu Gly Phe Val Leu Glu Gly Lys Lys Phe
Ala Arg 850 855 860
Leu Pro Glu Glu Glu Phe Gly His Phe Tyr Thr Gln Asp Cys Tyr Val 865
870 875 880 Phe Leu Cys Arg Tyr
Trp Val Pro Val Glu Tyr Glu Glu Glu Glu Lys 885
890 895 Lys Glu Asp Lys Glu Glu Lys Ala Glu Gly
Lys Glu Gly Glu Glu Ala 900 905
910 Thr Ala Glu Ala Glu Glu Lys Gln Pro Glu Glu Asp Phe Gln Cys
Ile 915 920 925 Val
Tyr Phe Trp Gln Gly Arg Glu Ala Ser Asn Met Gly Trp Leu Thr 930
935 940 Phe Thr Phe Ser Leu Gln
Lys Lys Phe Glu Ser Leu Phe Pro Gly Lys 945 950
955 960 Leu Glu Val Val Arg Met Thr Gln Gln Gln Glu
Asn Pro Lys Phe Leu 965 970
975 Ser His Phe Lys Arg Lys Phe Ile Ile His Arg Gly Lys Arg Lys Ala
980 985 990 Val Gln
Gly Ala Gln Gln Pro Ser Leu Tyr Gln Ile Arg Thr Asn Gly 995
1000 1005 Ser Ala Leu Cys Thr
Arg Cys Ile Gln Ile Asn Thr Asp Ser Ser 1010 1015
1020 Leu Leu Asn Ser Glu Phe Cys Phe Ile Leu
Lys Val Pro Phe Glu 1025 1030 1035
Ser Glu Asp Asn Gln Gly Ile Val Tyr Ala Trp Val Gly Arg Ala
1040 1045 1050 Ser Asp
Pro Asp Glu Ala Lys Leu Ala Glu Asp Ile Leu Asn Thr 1055
1060 1065 Met Phe Asp Thr Ser Tyr Ser
Lys Gln Val Ile Asn Glu Gly Glu 1070 1075
1080 Glu Pro Glu Asn Phe Phe Trp Val Gly Ile Gly Ala
Gln Lys Pro 1085 1090 1095
Tyr Asp Asp Asp Ala Glu Tyr Met Lys His Thr Arg Leu Phe Arg 1100
1105 1110 Cys Ser Asn Glu Lys
Gly Tyr Phe Ala Val Thr Glu Lys Cys Ser 1115 1120
1125 Asp Phe Cys Gln Asp Asp Leu Ala Asp Asp
Asp Ile Met Leu Leu 1130 1135 1140
Asp Asn Gly Gln Glu Val Tyr Met Trp Val Gly Thr Gln Thr Ser
1145 1150 1155 Gln Val
Glu Ile Lys Leu Ser Leu Lys Ala Cys Gln Val Tyr Ile 1160
1165 1170 Gln His Met Arg Ser Lys Glu
His Glu Arg Pro Arg Arg Leu Arg 1175 1180
1185 Leu Val Arg Lys Gly Asn Glu Gln His Ala Phe Thr
Arg Cys Phe 1190 1195 1200
His Ala Trp Ser Ala Phe Cys Lys Ala Leu Ala 1205
1210 74109DNAHomo sapiens 7cgggccgggg cggcgcgagc
ggctggagca acgggccccg cggcagctgc gggcgacgcg 60gtcgatggac atgggcaccc
agggatcggg gcgcaagcgg ctccccaacc gggagcggct 120cacggcggag gacgacgcgc
tcaaccagat cgcgcgggag gcggaagccc ggctcgctgc 180aaaacgggcg gcccgcgcgg
aggctcgcga gatccgcatg aaggagctgg agcggcagca 240gaaggagatc tatcaggtcc
aaaagaaata ttatgggctg gatacaaaat ggggtgacat 300cgagcagtgg atggaagaca
gtgagcgcta ctctcgtaga tccagaagaa acacatcggc 360ttctgatgaa gacgagcgca
tgtcagtggg tagtcgtgga agcctgaggt cgcagcctga 420cttggagtat gggggtcctt
acgcctggac aaatggttat gatggagaat tgtatggatc 480acagtccctg aatagaagat
ctggcaggcc ctcctgtctg tacagcgctg cccggccttc 540ggggagttac cgggcgtctg
tgttggatga aggcagcttc ggtgggaccc gacggggcag 600cacctccggc tcccgtgctc
cctcggagta cagcggccac ctcaactcca gctcccgcgc 660ctcctccagg gccagctcgg
cccgggccag ccctgtggta gaagagagac cagaaaaaga 720ttttactgag aaggggtctc
gtaacatgcc gggcctgtct gcagccacgc tggcctctct 780gggtgggact tcctctcgga
gaggcagcgg agacacctcc atctccatcg acaccgaggc 840atccatcagg gaaatcaagg
aactcaatga gttaaaggac cagattcagg atgtagaagg 900caaatacatg cagggattga
aagagatgaa ggactctcta gcagaagttg aagagaaata 960taagaaggct atggtttcca
atgctcagct agacaatgaa aagacaaact tcatgtacca 1020ggttgatacc ctaaaagata
tgttgctgga gcttgaagaa cagctggctg aatctaggcg 1080gcagtacgaa gagaaaaaca
aagaatttga aagggaaaaa cacgcccaca gtatactgca 1140atttcagttt gctgaagtca
aggaggccct gaagcaaaga gaggaaatgc tcgaggaaat 1200ccgacagcta cagcagaaac
aggcgagttc tatcagggag atttctgatc ttcaggaaac 1260aatagagtgg aaagacaaaa
agataggggc attagagagg cagaaagagt tctttgattc 1320cgtaaggagt gaacgggatg
atcttagaga agaagtagtc atgctgaaag aggaattaaa 1380gaaacatgga ataatcctaa
attcagaaat agctaccaat ggagagactt ccgacaccct 1440caataatgtt ggataccaag
gtcctaccaa gatgacaaaa gaagagttaa atgccctcaa 1500gtcgacaggg gatgggaccc
tagatattag gttgaaaaag ctggttgatg aacgggaatg 1560cttattggaa cagattaaga
aactcaaagg gcagctggag gagagacaga agattggcaa 1620actagacaat cttcgatctg
aagatgatgt cttggaaaac gggacagaca tgcatgtaat 1680ggacctacaa agggatgcca
acagacagat cagcgacctc aaatttaaac ttgcaaaatc 1740tgagcaagag ataactgcat
tagaacaaaa tgtaataagg ttagagagtc aagtatcacg 1800ttacaaatca gcggctgaaa
atgcagaaaa aatagaagat gaacttaagg cagaaaaacg 1860gaaactccaa agagagctcc
gctctgcatt ggataaaaca gaagagctcg aggtgagcaa 1920cggccactta gtgaagcgtc
tggaaaaaat gaaagcaaat cggagtgcac tcttgtccca 1980gcagtaaatt ccagctctga
tcaggcaact ggttggtgac tggagagcat tgtttcatag 2040gcttttctct gtcctatctg
ggagcgctgc ttcttcccct gccttccgag agacgaagac 2100cgtggcgagc ttggcgctta
ggggctcccg tgccatggct caccccaggg agccccagca 2160gccaccaggt gcctctgtct
gcagacccct ggcccgggct ggcgccgacg ctcagaacct 2220gcaggtactt cataagcaca
caggggcctc gagggagctc tgtgtctgac cgcacagcag 2280cctctgaatg ccgctggaag
tgatgatcaa agtaaagatt cagttgggac ttgagttttt 2340tttttttttc atgtgtcttg
ctgaagatta aggggaaatg ttacagtgtt gggacttcct 2400ttcatggcag aatctacaat
ttgagcgact tcagtagtat ctcttagtct acgcttttca 2460tacacaaaac actgtggaac
cacaagccat taccaagcaa aactctttca ctggaaacaa 2520gggggcagtc tagaagtaaa
agtgacctta agaagactct ttacaggcaa caaatgaagc 2580ttttctaagg gatttttgca
tcagttcagt cataagaata cttttttcca gggtaattag 2640gcaatagctt cactgaaaat
gacagctttt cattgcatta tttaatcctt atatttggaa 2700ttgaagtcgt taacttcttt
taaagaatgt actattagaa aaattaaaaa tgaaatgttg 2760agagacttca gcaatgtggt
tctaattttt ttccactgag aaagaagatc tttaatttca 2820tattaatggt tctgtatatt
ttgggtcatc tttttatttt ttaagaatat caagtcaatt 2880catttttctt tccctattta
aaaaaaaagg tgttttcaca gaatgagtgc acttaaaaag 2940tgaagtgaag gaggaggtaa
cagtagagac gatggcaata tcatcaagga caaaagtaaa 3000aacgtttagc tacctgctga
tttttagtga ctgttcatat atgttgtatt tcaagtatgg 3060ctggtgaagc cagtcagctt
ttcgggacgt tagcaagtgg aaactgagtc agtatcatcc 3120aaaaccatat ctagtcttaa
cacatggaga atgctggagt gagggttgtg agttcagggt 3180atataatcaa gaaaacactc
ccagcataat gctaggggtc accagtgtcc atcccccaga 3240actgtatgga tctaggatat
acacagctgc gttgcattaa gaaagagatg aaatctctat 3300taaaatacac aagatttttg
tatctccttg tgcagaggat atttgccact gcccattggg 3360aagcagacaa gttatagggg
gctgggggcc aacactggca agtaggaaac cacgggtcgg 3420acaggtgagc aaaatgtgct
ggcaggtggg caccactggg agacccacac tgcacacccg 3480ggcaccgtat gaacaggaaa
gaggaaggaa gctggacgaa gcccctcagg gaccctgtgc 3540tgaccatgct gggcccaccg
gcaaaaggga gatattcagt tccttgtctc atccttaagg 3600tttcttccac aacatctgaa
tacaagcatg tttaactggg aaaatgtcta tgtcatgcgt 3660gaataacacc agcagcaaac
actcacacat cacgcagaca cggccggcag catgctgacg 3720cttttaggta tttttcactc
atgcaatttt cacatatttt cactcatttc atttgcacgg 3780aaattctatg aggtagatgc
tgttatcaaa tccacattac agatgaggga cccagggtcc 3840aggaaggtga actggcagaa
gtctcccagc tggtagaaca gggctgcaag gcatcgattc 3900ccaggtgtct cacagccctg
agaagatggc gttttcccta tcagtggctc tgaggaagtc 3960aagccttcag tctctacctc
tcccaccaat tcttttggaa acagcaaacc aatgttacac 4020acacttccta atccagagga
agctagaaca cgatttttaa atttatttag taaaataaaa 4080ctttttttgc agatgtaacg
aaaaaaaaa 41098640PRTHomo sapiens
8Met Asp Met Gly Thr Gln Gly Ser Gly Arg Lys Arg Leu Pro Asn Arg 1
5 10 15 Glu Arg Leu Thr
Ala Glu Asp Asp Ala Leu Asn Gln Ile Ala Arg Glu 20
25 30 Ala Glu Ala Arg Leu Ala Ala Lys Arg
Ala Ala Arg Ala Glu Ala Arg 35 40
45 Glu Ile Arg Met Lys Glu Leu Glu Arg Gln Gln Lys Glu Ile
Tyr Gln 50 55 60
Val Gln Lys Lys Tyr Tyr Gly Leu Asp Thr Lys Trp Gly Asp Ile Glu 65
70 75 80 Gln Trp Met Glu Asp
Ser Glu Arg Tyr Ser Arg Arg Ser Arg Arg Asn 85
90 95 Thr Ser Ala Ser Asp Glu Asp Glu Arg Met
Ser Val Gly Ser Arg Gly 100 105
110 Ser Leu Arg Ser Gln Pro Asp Leu Glu Tyr Gly Gly Pro Tyr Ala
Trp 115 120 125 Thr
Asn Gly Tyr Asp Gly Glu Leu Tyr Gly Ser Gln Ser Leu Asn Arg 130
135 140 Arg Ser Gly Arg Pro Ser
Cys Leu Tyr Ser Ala Ala Arg Pro Ser Gly 145 150
155 160 Ser Tyr Arg Ala Ser Val Leu Asp Glu Gly Ser
Phe Gly Gly Thr Arg 165 170
175 Arg Gly Ser Thr Ser Gly Ser Arg Ala Pro Ser Glu Tyr Ser Gly His
180 185 190 Leu Asn
Ser Ser Ser Arg Ala Ser Ser Arg Ala Ser Ser Ala Arg Ala 195
200 205 Ser Pro Val Val Glu Glu Arg
Pro Glu Lys Asp Phe Thr Glu Lys Gly 210 215
220 Ser Arg Asn Met Pro Gly Leu Ser Ala Ala Thr Leu
Ala Ser Leu Gly 225 230 235
240 Gly Thr Ser Ser Arg Arg Gly Ser Gly Asp Thr Ser Ile Ser Ile Asp
245 250 255 Thr Glu Ala
Ser Ile Arg Glu Ile Lys Glu Leu Asn Glu Leu Lys Asp 260
265 270 Gln Ile Gln Asp Val Glu Gly Lys
Tyr Met Gln Gly Leu Lys Glu Met 275 280
285 Lys Asp Ser Leu Ala Glu Val Glu Glu Lys Tyr Lys Lys
Ala Met Val 290 295 300
Ser Asn Ala Gln Leu Asp Asn Glu Lys Thr Asn Phe Met Tyr Gln Val 305
310 315 320 Asp Thr Leu Lys
Asp Met Leu Leu Glu Leu Glu Glu Gln Leu Ala Glu 325
330 335 Ser Arg Arg Gln Tyr Glu Glu Lys Asn
Lys Glu Phe Glu Arg Glu Lys 340 345
350 His Ala His Ser Ile Leu Gln Phe Gln Phe Ala Glu Val Lys
Glu Ala 355 360 365
Leu Lys Gln Arg Glu Glu Met Leu Glu Glu Ile Arg Gln Leu Gln Gln 370
375 380 Lys Gln Ala Ser Ser
Ile Arg Glu Ile Ser Asp Leu Gln Glu Thr Ile 385 390
395 400 Glu Trp Lys Asp Lys Lys Ile Gly Ala Leu
Glu Arg Gln Lys Glu Phe 405 410
415 Phe Asp Ser Val Arg Ser Glu Arg Asp Asp Leu Arg Glu Glu Val
Val 420 425 430 Met
Leu Lys Glu Glu Leu Lys Lys His Gly Ile Ile Leu Asn Ser Glu 435
440 445 Ile Ala Thr Asn Gly Glu
Thr Ser Asp Thr Leu Asn Asn Val Gly Tyr 450 455
460 Gln Gly Pro Thr Lys Met Thr Lys Glu Glu Leu
Asn Ala Leu Lys Ser 465 470 475
480 Thr Gly Asp Gly Thr Leu Asp Ile Arg Leu Lys Lys Leu Val Asp Glu
485 490 495 Arg Glu
Cys Leu Leu Glu Gln Ile Lys Lys Leu Lys Gly Gln Leu Glu 500
505 510 Glu Arg Gln Lys Ile Gly Lys
Leu Asp Asn Leu Arg Ser Glu Asp Asp 515 520
525 Val Leu Glu Asn Gly Thr Asp Met His Val Met Asp
Leu Gln Arg Asp 530 535 540
Ala Asn Arg Gln Ile Ser Asp Leu Lys Phe Lys Leu Ala Lys Ser Glu 545
550 555 560 Gln Glu Ile
Thr Ala Leu Glu Gln Asn Val Ile Arg Leu Glu Ser Gln 565
570 575 Val Ser Arg Tyr Lys Ser Ala Ala
Glu Asn Ala Glu Lys Ile Glu Asp 580 585
590 Glu Leu Lys Ala Glu Lys Arg Lys Leu Gln Arg Glu Leu
Arg Ser Ala 595 600 605
Leu Asp Lys Thr Glu Glu Leu Glu Val Ser Asn Gly His Leu Val Lys 610
615 620 Arg Leu Glu Lys
Met Lys Ala Asn Arg Ser Ala Leu Leu Ser Gln Gln 625 630
635 640 93599DNAHomo sapiens 9ccgtgggacg
ggcggaggcg cccgagtccc gcttccccgg cgcccttcca ccccgagccc 60gactcagccc
gcggccacct gcgccccgcc cctgtcggcc gcgcccgagc ccagcgccgc 120gagccgctcc
ccggcgggct ggctcctggc cccggaagcg cgagcgttca cttagcggcg 180agtggctccg
tctccgcgga cagagcgcgc gccccctggc ccggcccgcg aggggctccc 240ggcgcggtcc
ccgagcattt cccgccgggt ggagcgggcc gagcccggca ggatgaccag 300ccccgcggcc
gctcaaagcc gggagatcga ctgtttgagc ccggaagcgc agaagctggc 360ggaagcccgg
ctcgctgcaa aacgggcggc ccgcgcggag gctcgcgaga tccgcatgaa 420ggagctggag
cggcagcaga aggaggtaga agagagacca gaaaaagatt ttactgagaa 480ggggtctcgt
aacatgccgg gcctgtctgc agccacgctg gcctctctgg gtgggacttc 540ctctcggaga
ggcagcggag acacctccat ctccatcgac accgaggcat ccatcaggga 600aatcaaggac
tctctagcag aagttgaaga gaaatataag aaggctatgg tttccaatgc 660tcagctagac
aatgaaaaga caaacttcat gtaccaggtt gataccctaa aagatatgtt 720gctggagctt
gaagaacagc tggctgaatc taggcggcag tacgaagaga aaaacaaaga 780atttgaaagg
gaaaaacacg cccacagtat actgcaattt cagtttgctg aagtcaagga 840ggccctgaag
caaagagagg aaatgctcga gaaacatgga ataatcctaa attcagaaat 900agctaccaat
ggagagactt ccgacaccct caataatgtt ggataccaag gtcctaccaa 960gatgacaaaa
gaagagttaa atgccctcaa gtcgacaggg gatgggaccc tagatattag 1020gttgaaaaag
ctggttgatg aacgggaatg cttattggaa cagattaaga aactcaaagg 1080gcagctggag
gagagacaga agattggcaa actagacaat cttcgatctg aagatgatgt 1140cttggaaaac
gggacagaca tgcatgtaat ggacctacaa agggatgcca acagacagat 1200cagcgacctc
aaatttaaac ttgcaaaatc tgagcaagag ataactgcat tagaacaaaa 1260tgtaataagg
ttagagagtc aagtatcacg ttacaaatca gcggctgaaa atgcagaaaa 1320aatagaagat
gaacttaagg cagaaaaacg gaaactccaa agagagctcc gctctgcatt 1380ggataaaaca
gaagagctcg aggtgagcaa cggccactta gtgaagcgtc tggaaaaaat 1440gaaagcaaat
cggagtgcac tcttgtccca gcagtaaatt ccagctctga tcaggcaact 1500ggttggtgac
tggagagcat tgtttcatag gcttttctct gtcctatctg ggagcgctgc 1560ttcttcccct
gccttccgag agacgaagac cgtggcgagc ttggcgctta ggggctcccg 1620tgccatggct
caccccaggg agccccagca gccaccaggt gcctctgtct gcagacccct 1680ggcccgggct
ggcgccgacg ctcagaacct gcaggtactt cataagcaca caggggcctc 1740gagggagctc
tgtgtctgac cgcacagcag cctctgaatg ccgctggaag tgatgatcaa 1800agtaaagatt
cagttgggac ttgagttttt tttttttttc atgtgtcttg ctgaagatta 1860aggggaaatg
ttacagtgtt gggacttcct ttcatggcag aatctacaat ttgagcgact 1920tcagtagtat
ctcttagtct acgcttttca tacacaaaac actgtggaac cacaagccat 1980taccaagcaa
aactctttca ctggaaacaa gggggcagtc tagaagtaaa agtgacctta 2040agaagactct
ttacaggcaa caaatgaagc ttttctaagg gatttttgca tcagttcagt 2100cataagaata
cttttttcca gggtaattag gcaatagctt cactgaaaat gacagctttt 2160cattgcatta
tttaatcctt atatttggaa ttgaagtcgt taacttcttt taaagaatgt 2220actattagaa
aaattaaaaa tgaaatgttg agagacttca gcaatgtggt tctaattttt 2280ttccactgag
aaagaagatc tttaatttca tattaatggt tctgtatatt ttgggtcatc 2340tttttatttt
ttaagaatat caagtcaatt catttttctt tccctattta aaaaaaaagg 2400tgttttcaca
gaatgagtgc acttaaaaag tgaagtgaag gaggaggtaa cagtagagac 2460gatggcaata
tcatcaagga caaaagtaaa aacgtttagc tacctgctga tttttagtga 2520ctgttcatat
atgttgtatt tcaagtatgg ctggtgaagc cagtcagctt ttcgggacgt 2580tagcaagtgg
aaactgagtc agtatcatcc aaaaccatat ctagtcttaa cacatggaga 2640atgctggagt
gagggttgtg agttcagggt atataatcaa gaaaacactc ccagcataat 2700gctaggggtc
accagtgtcc atcccccaga actgtatgga tctaggatat acacagctgc 2760gttgcattaa
gaaagagatg aaatctctat taaaatacac aagatttttg tatctccttg 2820tgcagaggat
atttgccact gcccattggg aagcagacaa gttatagggg gctgggggcc 2880aacactggca
agtaggaaac cacgggtcgg acaggtgagc aaaatgtgct ggcaggtggg 2940caccactggg
agacccacac tgcacacccg ggcaccgtat gaacaggaaa gaggaaggaa 3000gctggacgaa
gcccctcagg gaccctgtgc tgaccatgct gggcccaccg gcaaaaggga 3060gatattcagt
tccttgtctc atccttaagg tttcttccac aacatctgaa tacaagcatg 3120tttaactggg
aaaatgtcta tgtcatgcgt gaataacacc agcagcaaac actcacacat 3180cacgcagaca
cggccggcag catgctgacg cttttaggta tttttcactc atgcaatttt 3240cacatatttt
cactcatttc atttgcacgg aaattctatg aggtagatgc tgttatcaaa 3300tccacattac
agatgaggga cccagggtcc aggaaggtga actggcagaa gtctcccagc 3360tggtagaaca
gggctgcaag gcatcgattc ccaggtgtct cacagccctg agaagatggc 3420gttttcccta
tcagtggctc tgaggaagtc aagccttcag tctctacctc tcccaccaat 3480tcttttggaa
acagcaaacc aatgttacac acacttccta atccagagga agctagaaca 3540cgatttttaa
atttatttag taaaataaaa ctttttttgc agatgtaacg aaaaaaaaa 359910394PRTHomo
sapiens 10Met Thr Ser Pro Ala Ala Ala Gln Ser Arg Glu Ile Asp Cys Leu Ser
1 5 10 15 Pro Glu
Ala Gln Lys Leu Ala Glu Ala Arg Leu Ala Ala Lys Arg Ala 20
25 30 Ala Arg Ala Glu Ala Arg Glu
Ile Arg Met Lys Glu Leu Glu Arg Gln 35 40
45 Gln Lys Glu Val Glu Glu Arg Pro Glu Lys Asp Phe
Thr Glu Lys Gly 50 55 60
Ser Arg Asn Met Pro Gly Leu Ser Ala Ala Thr Leu Ala Ser Leu Gly 65
70 75 80 Gly Thr Ser
Ser Arg Arg Gly Ser Gly Asp Thr Ser Ile Ser Ile Asp 85
90 95 Thr Glu Ala Ser Ile Arg Glu Ile
Lys Asp Ser Leu Ala Glu Val Glu 100 105
110 Glu Lys Tyr Lys Lys Ala Met Val Ser Asn Ala Gln Leu
Asp Asn Glu 115 120 125
Lys Thr Asn Phe Met Tyr Gln Val Asp Thr Leu Lys Asp Met Leu Leu 130
135 140 Glu Leu Glu Glu
Gln Leu Ala Glu Ser Arg Arg Gln Tyr Glu Glu Lys 145 150
155 160 Asn Lys Glu Phe Glu Arg Glu Lys His
Ala His Ser Ile Leu Gln Phe 165 170
175 Gln Phe Ala Glu Val Lys Glu Ala Leu Lys Gln Arg Glu Glu
Met Leu 180 185 190
Glu Lys His Gly Ile Ile Leu Asn Ser Glu Ile Ala Thr Asn Gly Glu
195 200 205 Thr Ser Asp Thr
Leu Asn Asn Val Gly Tyr Gln Gly Pro Thr Lys Met 210
215 220 Thr Lys Glu Glu Leu Asn Ala Leu
Lys Ser Thr Gly Asp Gly Thr Leu 225 230
235 240 Asp Ile Arg Leu Lys Lys Leu Val Asp Glu Arg Glu
Cys Leu Leu Glu 245 250
255 Gln Ile Lys Lys Leu Lys Gly Gln Leu Glu Glu Arg Gln Lys Ile Gly
260 265 270 Lys Leu Asp
Asn Leu Arg Ser Glu Asp Asp Val Leu Glu Asn Gly Thr 275
280 285 Asp Met His Val Met Asp Leu Gln
Arg Asp Ala Asn Arg Gln Ile Ser 290 295
300 Asp Leu Lys Phe Lys Leu Ala Lys Ser Glu Gln Glu Ile
Thr Ala Leu 305 310 315
320 Glu Gln Asn Val Ile Arg Leu Glu Ser Gln Val Ser Arg Tyr Lys Ser
325 330 335 Ala Ala Glu Asn
Ala Glu Lys Ile Glu Asp Glu Leu Lys Ala Glu Lys 340
345 350 Arg Lys Leu Gln Arg Glu Leu Arg Ser
Ala Leu Asp Lys Thr Glu Glu 355 360
365 Leu Glu Val Ser Asn Gly His Leu Val Lys Arg Leu Glu Lys
Met Lys 370 375 380
Ala Asn Arg Ser Ala Leu Leu Ser Gln Gln 385 390
114510DNAHomo sapiens 11ccgtgggacg ggcggaggcg cccgagtccc gcttccccgg
cgcccttcca ccccgagccc 60gactcagccc gcggccacct gcgccccgcc cctgtcggcc
gcgcccgagc ccagcgccgc 120gagccgctcc ccggcgggct ggctcctggc cccggaagcg
cgagcgttca cttagcggcg 180agtggctccg tctccgcgga cagagcgcgc gccccctggc
ccggcccgcg aggggctccc 240ggcgcggtcc ccgagcattt cccgccgggt ggagcgggcc
gagcccggca ggatgaccag 300ccccgcggcc gctcaaagcc gggagatcga ctgtttgagc
ccggaagcgc agaagctggc 360ggaagcccgg ctcgctgcaa aacgggcggc ccgcgcggag
gctcgcgaga tccgcatgaa 420ggagctggag cggcagcaga aggaggaaga cagtgagcgc
tactctcgta gatccagaag 480aaacacatcg gcttctgatg aagacgagcg catgtcagtg
ggtagtcgtg gaagcctgag 540ggtagaagag agaccagaaa aagattttac tgagaagggg
tctcgtaaca tgccgggcct 600gtctgcagcc acgctggcct ctctgggtgg gacttcctct
cggagaggca gcggagacac 660ctccatctcc atcgacaccg aggcatccat cagggaaatc
aaggaactca atgagttaaa 720ggaccagatt caggatgtag aaggcaaata catgcaggga
ttgaaagaga tgaaggactc 780tctagcagaa gttgaagaga aatataagaa ggctatggtt
tccaatgctc agctagacaa 840tgaaaagaca aacttcatgt accaggttga taccctaaaa
gatatgttgc tggagcttga 900agaacagctg gctgaatcta ggcggcagta cgaagagaaa
aacaaagaat ttgaaaggga 960aaaacacgcc cacagtatac tgcaatttca gtttgctgaa
gtcaaggagg ccctgaagca 1020aagagaggaa atgctcgaga aacatggaat aatcctaaat
tcagaaatag ctaccaatgg 1080agagacttcc gacaccctca ataatgttgg ataccaaggt
cctaccaaga tgacaaaaga 1140agagttaaat gccctcaagt cgacagggga tgggacccta
ggaagagcca gtgaagtgga 1200ggtgaaaaat gaaatcgtgg cgaatgtggg gaaaagagaa
atcttgcaca atactgagaa 1260agaacaacac acagaggaca cagtgaagga ctgtgtggac
atagaggtat tccctgctgg 1320tgagaatacc gaggaccaga aatcctctga agacactgcc
ccattcctag gaaccttagc 1380aggtgctacc tatgaggaac aggttcaaag ccaaattctt
gagagcagtt ctctccctga 1440aaacacagta caggttgagt caaatgaggt catgggtgca
ccagatgaca ggaccagaac 1500tccccttgag ccatccaact gttggagtga cttagatggt
gggaaccaca cagagaatgt 1560gggagaggca gcagtgactc aggttgaaga gcaggcaggc
acagtggcct cgtgtccttt 1620agggcatagt gatgacacag tttatcatga tgacaaatgt
atggtagagg tcccccaaga 1680gttagagaca agcacagggc atagtttaga gaaagaattc
accaaccagg aagcagctga 1740gcccaaggag gttccagcgc acagtacaga agtaggtagg
gatcacaacg aagaagaggg 1800tgaagaaaca ggattaaggg acgagaaacc aatcaagaca
gaagttcctg gttctccagc 1860aggaactgag ggcaactgtc aggaagcgac aggtccaagt
acagtagaca ctcaaaatga 1920acccttagat atgaaagagc ccgatgaaga aaagagtgac
caacagggag aggcattgga 1980ctcatcgcag aagaagacaa agaacaagaa aaagaaaaac
aagaagaaaa aatccccagt 2040acccgtagaa acccttaaag atgttaaaaa agagttaacg
tatcagaaca cagatttaag 2100tgaaattaag gaagaagagc aggtaaagtc tactgacaga
aagtcagcag tggaagccca 2160aaacgaggtg actgaaaatc caaaacagaa aattgcagca
gaaagcagtg aaaatgttga 2220ttgtccggag aatcctaaaa ttaagttgga tggaaaactt
gaccaagaag gtgatgatgt 2280acaaacagca gctgaggagg tactagctga tggagacaca
ttagattttg aggatgacac 2340cgttcaatca tcaggcccga gggctggtgg tgaagaatta
gatgaaggtg ttgcaaaaga 2400taatgctaaa atagatggtg ccactcaaag cagtcctgca
gaaccaaaga gcgaagacgc 2460agatcgctgc accctgcccg aacatgaaag tccctcacag
gacattagtg atgcctgtga 2520agcagaaagt acagagaggt gtgagatgtc agaacatcca
agtcagaccg tcaggaaagc 2580tttagacagc aatagcctag agaacgatga cttgtcggca
ccaggaagag agccagggca 2640cttcaatcca gaaagcagag aagataccag aggagggaat
gagaagggca aaagcaaaga 2700agactgtacc atgtcctaag ctgaggcagg cggcaggcgc
ggtgcacagg aagtctcagt 2760gtgaaggggt cttttctctc cactgccaat gtaagtagaa
tgttctaaat tcatagagag 2820gcactgtatg acaattacca ggtgctctac tgctttaagt
tatagactgt tacttgtaga 2880tttccatgta atcattgagg ttatcaccca gattagaaag
acatatttgt tatcagtgta 2940cgttctaatt gagagcattc cagtagtatc aaacaataat
gtctactgtt tatagtccac 3000ttaataaaaa tagaggcatt tactatttgc cttaggctga
taggaatgtg ggttttcttg 3060accaaatata tcagcatcta attgaaatga ccaaatagca
ttcttagact tctgtattat 3120gaatataatt gatatttaaa ttaatgtctt gttcacatat
gtgtactttc atatttgatt 3180ttaaaatgta cattataacc tgtatggtat tttatttaaa
ggagataaac agccaaatag 3240caaataggtc actgaatgat aagatttgca ccttagaaca
ataatcattt taaggataac 3300aagtaaatgt ctgaaagcat gaggggcttt atttgccttt
acctcatatg agtctttgat 3360cttgaaccga tacttttgga tctcattgtt gatatacctg
aatttacttt gtaagagatt 3420ttaacttcac ttcatgctga tgatgtatca aattcatttt
atagaaagat ttaaagtttt 3480tttctggaag tgatatatgt caaattacat ttcctactgc
agtatttgag cagggacagt 3540cattttttaa atgtttttgg ccgggcgtgg tggctcatgc
ctgtaatctc agtacattgg 3600gaggccaagg caggtggatc acctgaggtc aagagttcga
ggccagcctg gccaacatgg 3660tgaaaccctg tctctactaa aaatacaaaa aattggccgg
gcgtgatggt gggcgcctgt 3720aatcccagcc actccagagg ctgaggcagg agaatcgctt
gaacctgcga ggcagagatt 3780gcagtgagcc aagatcaagc cattgtactc cagcctggac
aacaagagcg aaactctgtc 3840taaaaaaaaa aaaaaaaaca cacacacaca caacacaatg
ttttcacgcc tgtaaaccta 3900gcacattggg aagccaaggt gggaggattg cttgaggcca
ggagttcaag gctgcagtga 3960gctatgattg cacactgtac tctagcctgg gagacagagt
gagacactgt ctctaaaaaa 4020aaaaaaaaaa aaaaaaaaag tttttgaacc ttaaaatact
ttgtttgaat ttctaatcat 4080cattcaaaag agcagtaaaa aatggttact tgttcttgta
caagctacta attagactat 4140agtaggatat tttaaagagc tgaatcactt ttggtatttt
ggtataaata ttttcatttg 4200ttatgtccca gtatattctt actggaaaat tcttgttttg
atctgcctga agaaaatatc 4260tgttttctat ataaaaaaat tttttaaaat aattgtaaag
ttagatttaa aattgtaaaa 4320tataaaatca caaaggaatg taccttatga atgttgttga
cattttatga aattatgtgg 4380attcatatta ctgttacaag atagaattga atgcaaaaag
accaaaacct caataaaatt 4440tgaggaaaac gtgttattat gtaattgaaa taaaaacatt
ttataattgt gcaaaaaaaa 4500aaaaaaaaaa
451012808PRTHomo sapiens 12Met Thr Ser Pro Ala Ala
Ala Gln Ser Arg Glu Ile Asp Cys Leu Ser 1 5
10 15 Pro Glu Ala Gln Lys Leu Ala Glu Ala Arg Leu
Ala Ala Lys Arg Ala 20 25
30 Ala Arg Ala Glu Ala Arg Glu Ile Arg Met Lys Glu Leu Glu Arg
Gln 35 40 45 Gln
Lys Glu Glu Asp Ser Glu Arg Tyr Ser Arg Arg Ser Arg Arg Asn 50
55 60 Thr Ser Ala Ser Asp Glu
Asp Glu Arg Met Ser Val Gly Ser Arg Gly 65 70
75 80 Ser Leu Arg Val Glu Glu Arg Pro Glu Lys Asp
Phe Thr Glu Lys Gly 85 90
95 Ser Arg Asn Met Pro Gly Leu Ser Ala Ala Thr Leu Ala Ser Leu Gly
100 105 110 Gly Thr
Ser Ser Arg Arg Gly Ser Gly Asp Thr Ser Ile Ser Ile Asp 115
120 125 Thr Glu Ala Ser Ile Arg Glu
Ile Lys Glu Leu Asn Glu Leu Lys Asp 130 135
140 Gln Ile Gln Asp Val Glu Gly Lys Tyr Met Gln Gly
Leu Lys Glu Met 145 150 155
160 Lys Asp Ser Leu Ala Glu Val Glu Glu Lys Tyr Lys Lys Ala Met Val
165 170 175 Ser Asn Ala
Gln Leu Asp Asn Glu Lys Thr Asn Phe Met Tyr Gln Val 180
185 190 Asp Thr Leu Lys Asp Met Leu Leu
Glu Leu Glu Glu Gln Leu Ala Glu 195 200
205 Ser Arg Arg Gln Tyr Glu Glu Lys Asn Lys Glu Phe Glu
Arg Glu Lys 210 215 220
His Ala His Ser Ile Leu Gln Phe Gln Phe Ala Glu Val Lys Glu Ala 225
230 235 240 Leu Lys Gln Arg
Glu Glu Met Leu Glu Lys His Gly Ile Ile Leu Asn 245
250 255 Ser Glu Ile Ala Thr Asn Gly Glu Thr
Ser Asp Thr Leu Asn Asn Val 260 265
270 Gly Tyr Gln Gly Pro Thr Lys Met Thr Lys Glu Glu Leu Asn
Ala Leu 275 280 285
Lys Ser Thr Gly Asp Gly Thr Leu Gly Arg Ala Ser Glu Val Glu Val 290
295 300 Lys Asn Glu Ile Val
Ala Asn Val Gly Lys Arg Glu Ile Leu His Asn 305 310
315 320 Thr Glu Lys Glu Gln His Thr Glu Asp Thr
Val Lys Asp Cys Val Asp 325 330
335 Ile Glu Val Phe Pro Ala Gly Glu Asn Thr Glu Asp Gln Lys Ser
Ser 340 345 350 Glu
Asp Thr Ala Pro Phe Leu Gly Thr Leu Ala Gly Ala Thr Tyr Glu 355
360 365 Glu Gln Val Gln Ser Gln
Ile Leu Glu Ser Ser Ser Leu Pro Glu Asn 370 375
380 Thr Val Gln Val Glu Ser Asn Glu Val Met Gly
Ala Pro Asp Asp Arg 385 390 395
400 Thr Arg Thr Pro Leu Glu Pro Ser Asn Cys Trp Ser Asp Leu Asp Gly
405 410 415 Gly Asn
His Thr Glu Asn Val Gly Glu Ala Ala Val Thr Gln Val Glu 420
425 430 Glu Gln Ala Gly Thr Val Ala
Ser Cys Pro Leu Gly His Ser Asp Asp 435 440
445 Thr Val Tyr His Asp Asp Lys Cys Met Val Glu Val
Pro Gln Glu Leu 450 455 460
Glu Thr Ser Thr Gly His Ser Leu Glu Lys Glu Phe Thr Asn Gln Glu 465
470 475 480 Ala Ala Glu
Pro Lys Glu Val Pro Ala His Ser Thr Glu Val Gly Arg 485
490 495 Asp His Asn Glu Glu Glu Gly Glu
Glu Thr Gly Leu Arg Asp Glu Lys 500 505
510 Pro Ile Lys Thr Glu Val Pro Gly Ser Pro Ala Gly Thr
Glu Gly Asn 515 520 525
Cys Gln Glu Ala Thr Gly Pro Ser Thr Val Asp Thr Gln Asn Glu Pro 530
535 540 Leu Asp Met Lys
Glu Pro Asp Glu Glu Lys Ser Asp Gln Gln Gly Glu 545 550
555 560 Ala Leu Asp Ser Ser Gln Lys Lys Thr
Lys Asn Lys Lys Lys Lys Asn 565 570
575 Lys Lys Lys Lys Ser Pro Val Pro Val Glu Thr Leu Lys Asp
Val Lys 580 585 590
Lys Glu Leu Thr Tyr Gln Asn Thr Asp Leu Ser Glu Ile Lys Glu Glu
595 600 605 Glu Gln Val Lys
Ser Thr Asp Arg Lys Ser Ala Val Glu Ala Gln Asn 610
615 620 Glu Val Thr Glu Asn Pro Lys Gln
Lys Ile Ala Ala Glu Ser Ser Glu 625 630
635 640 Asn Val Asp Cys Pro Glu Asn Pro Lys Ile Lys Leu
Asp Gly Lys Leu 645 650
655 Asp Gln Glu Gly Asp Asp Val Gln Thr Ala Ala Glu Glu Val Leu Ala
660 665 670 Asp Gly Asp
Thr Leu Asp Phe Glu Asp Asp Thr Val Gln Ser Ser Gly 675
680 685 Pro Arg Ala Gly Gly Glu Glu Leu
Asp Glu Gly Val Ala Lys Asp Asn 690 695
700 Ala Lys Ile Asp Gly Ala Thr Gln Ser Ser Pro Ala Glu
Pro Lys Ser 705 710 715
720 Glu Asp Ala Asp Arg Cys Thr Leu Pro Glu His Glu Ser Pro Ser Gln
725 730 735 Asp Ile Ser Asp
Ala Cys Glu Ala Glu Ser Thr Glu Arg Cys Glu Met 740
745 750 Ser Glu His Pro Ser Gln Thr Val Arg
Lys Ala Leu Asp Ser Asn Ser 755 760
765 Leu Glu Asn Asp Asp Leu Ser Ala Pro Gly Arg Glu Pro Gly
His Phe 770 775 780
Asn Pro Glu Ser Arg Glu Asp Thr Arg Gly Gly Asn Glu Lys Gly Lys 785
790 795 800 Ser Lys Glu Asp Cys
Thr Met Ser 805 134438DNAHomo sapiens
13ccgtgggacg ggcggaggcg cccgagtccc gcttccccgg cgcccttcca ccccgagccc
60gactcagccc gcggccacct gcgccccgcc cctgtcggcc gcgcccgagc ccagcgccgc
120gagccgctcc ccggcgggct ggctcctggc cccggaagcg cgagcgttca cttagcggcg
180agtggctccg tctccgcgga cagagcgcgc gccccctggc ccggcccgcg aggggctccc
240ggcgcggtcc ccgagcattt cccgccgggt ggagcgggcc gagcccggca ggatgaccag
300ccccgcggcc gctcaaagcc gggagatcga ctgtttgagc ccggaagcgc agaagctggc
360ggaagcccgg ctcgctgcaa aacgggcggc ccgcgcggag gctcgcgaga tccgcatgaa
420ggagctggag cggcagcaga aggaggaaga cagtgagcgc tactctcgta gatccagaag
480aaacacatcg gcttctgatg aagacgagcg catgtcagtg ggtagtcgtg gaagcctgag
540ggtagaagag agaccagaaa aagattttac tgagaagggg tctcgtaaca tgccgggcct
600gtctgcagcc acgctggcct ctctgggtgg gacttcctct cggagaggca gcggagacac
660ctccatctcc atcgacaccg aggcatccat cagggaaatc aaggactctc tagcagaagt
720tgaagagaaa tataagaagg ctatggtttc caatgctcag ctagacaatg aaaagacaaa
780cttcatgtac caggttgata ccctaaaaga tatgttgctg gagcttgaag aacagctggc
840tgaatctagg cggcagtacg aagagaaaaa caaagaattt gaaagggaaa aacacgccca
900cagtatactg caatttcagt ttgctgaagt caaggaggcc ctgaagcaaa gagaggaaat
960gctcgagaaa catggaataa tcctaaattc agaaatagct accaatggag agacttccga
1020caccctcaat aatgttggat accaaggtcc taccaagatg acaaaagaag agttaaatgc
1080cctcaagtcg acaggggatg ggaccctagg aagagccagt gaagtggagg tgaaaaatga
1140aatcgtggcg aatgtgggga aaagagaaat cttgcacaat actgagaaag aacaacacac
1200agaggacaca gtgaaggact gtgtggacat agaggtattc cctgctggtg agaataccga
1260ggaccagaaa tcctctgaag acactgcccc attcctagga accttagcag gtgctaccta
1320tgaggaacag gttcaaagcc aaattcttga gagcagttct ctccctgaaa acacagtaca
1380ggttgagtca aatgaggtca tgggtgcacc agatgacagg accagaactc cccttgagcc
1440atccaactgt tggagtgact tagatggtgg gaaccacaca gagaatgtgg gagaggcagc
1500agtgactcag gttgaagagc aggcaggcac agtggcctcg tgtcctttag ggcatagtga
1560tgacacagtt tatcatgatg acaaatgtat ggtagaggtc ccccaagagt tagagacaag
1620cacagggcat agtttagaga aagaattcac caaccaggaa gcagctgagc ccaaggaggt
1680tccagcgcac agtacagaag taggtaggga tcacaacgaa gaagagggtg aagaaacagg
1740attaagggac gagaaaccaa tcaagacaga agttcctggt tctccagcag gaactgaggg
1800caactgtcag gaagcgacag gtccaagtac agtagacact caaaatgaac ccttagatat
1860gaaagagccc gatgaagaaa agagtgacca acagggagag gcattggact catcgcagaa
1920gaagacaaag aacaagaaaa agaaaaacaa gaagaaaaaa tccccagtac ccgtagaaac
1980ccttaaagat gttaaaaaag agttaacgta tcagaacaca gatttaagtg aaattaagga
2040agaagagcag gtaaagtcta ctgacagaaa gtcagcagtg gaagcccaaa acgaggtgac
2100tgaaaatcca aaacagaaaa ttgcagcaga aagcagtgaa aatgttgatt gtccggagaa
2160tcctaaaatt aagttggatg gaaaacttga ccaagaaggt gatgatgtac aaacagcagc
2220tgaggaggta ctagctgatg gagacacatt agattttgag gatgacaccg ttcaatcatc
2280aggcccgagg gctggtggtg aagaattaga tgaaggtgtt gcaaaagata atgctaaaat
2340agatggtgcc actcaaagca gtcctgcaga accaaagagc gaagacgcag atcgctgcac
2400cctgcccgaa catgaaagtc cctcacagga cattagtgat gcctgtgaag cagaaagtac
2460agagaggtgt gagatgtcag aacatccaag tcagaccgtc aggaaagctt tagacagcaa
2520tagcctagag aacgatgact tgtcggcacc aggaagagag ccagggcact tcaatccaga
2580aagcagagaa gataccagag gagggaatga gaagggcaaa agcaaagaag actgtaccat
2640gtcctaagct gaggcaggcg gcaggcgcgg tgcacaggaa gtctcagtgt gaaggggtct
2700tttctctcca ctgccaatgt aagtagaatg ttctaaattc atagagaggc actgtatgac
2760aattaccagg tgctctactg ctttaagtta tagactgtta cttgtagatt tccatgtaat
2820cattgaggtt atcacccaga ttagaaagac atatttgtta tcagtgtacg ttctaattga
2880gagcattcca gtagtatcaa acaataatgt ctactgttta tagtccactt aataaaaata
2940gaggcattta ctatttgcct taggctgata ggaatgtggg ttttcttgac caaatatatc
3000agcatctaat tgaaatgacc aaatagcatt cttagacttc tgtattatga atataattga
3060tatttaaatt aatgtcttgt tcacatatgt gtactttcat atttgatttt aaaatgtaca
3120ttataacctg tatggtattt tatttaaagg agataaacag ccaaatagca aataggtcac
3180tgaatgataa gatttgcacc ttagaacaat aatcatttta aggataacaa gtaaatgtct
3240gaaagcatga ggggctttat ttgcctttac ctcatatgag tctttgatct tgaaccgata
3300cttttggatc tcattgttga tatacctgaa tttactttgt aagagatttt aacttcactt
3360catgctgatg atgtatcaaa ttcattttat agaaagattt aaagtttttt tctggaagtg
3420atatatgtca aattacattt cctactgcag tatttgagca gggacagtca ttttttaaat
3480gtttttggcc gggcgtggtg gctcatgcct gtaatctcag tacattggga ggccaaggca
3540ggtggatcac ctgaggtcaa gagttcgagg ccagcctggc caacatggtg aaaccctgtc
3600tctactaaaa atacaaaaaa ttggccgggc gtgatggtgg gcgcctgtaa tcccagccac
3660tccagaggct gaggcaggag aatcgcttga acctgcgagg cagagattgc agtgagccaa
3720gatcaagcca ttgtactcca gcctggacaa caagagcgaa actctgtcta aaaaaaaaaa
3780aaaaaacaca cacacacaca acacaatgtt ttcacgcctg taaacctagc acattgggaa
3840gccaaggtgg gaggattgct tgaggccagg agttcaaggc tgcagtgagc tatgattgca
3900cactgtactc tagcctggga gacagagtga gacactgtct ctaaaaaaaa aaaaaaaaaa
3960aaaaaaagtt tttgaacctt aaaatacttt gtttgaattt ctaatcatca ttcaaaagag
4020cagtaaaaaa tggttacttg ttcttgtaca agctactaat tagactatag taggatattt
4080taaagagctg aatcactttt ggtattttgg tataaatatt ttcatttgtt atgtcccagt
4140atattcttac tggaaaattc ttgttttgat ctgcctgaag aaaatatctg ttttctatat
4200aaaaaaattt tttaaaataa ttgtaaagtt agatttaaaa ttgtaaaata taaaatcaca
4260aaggaatgta ccttatgaat gttgttgaca ttttatgaaa ttatgtggat tcatattact
4320gttacaagat agaattgaat gcaaaaagac caaaacctca ataaaatttg aggaaaacgt
4380gttattatgt aattgaaata aaaacatttt ataattgtgc aaaaaaaaaa aaaaaaaa
443814784PRTHomo sapiens 14Met Thr Ser Pro Ala Ala Ala Gln Ser Arg Glu
Ile Asp Cys Leu Ser 1 5 10
15 Pro Glu Ala Gln Lys Leu Ala Glu Ala Arg Leu Ala Ala Lys Arg Ala
20 25 30 Ala Arg
Ala Glu Ala Arg Glu Ile Arg Met Lys Glu Leu Glu Arg Gln 35
40 45 Gln Lys Glu Glu Asp Ser Glu
Arg Tyr Ser Arg Arg Ser Arg Arg Asn 50 55
60 Thr Ser Ala Ser Asp Glu Asp Glu Arg Met Ser Val
Gly Ser Arg Gly 65 70 75
80 Ser Leu Arg Val Glu Glu Arg Pro Glu Lys Asp Phe Thr Glu Lys Gly
85 90 95 Ser Arg Asn
Met Pro Gly Leu Ser Ala Ala Thr Leu Ala Ser Leu Gly 100
105 110 Gly Thr Ser Ser Arg Arg Gly Ser
Gly Asp Thr Ser Ile Ser Ile Asp 115 120
125 Thr Glu Ala Ser Ile Arg Glu Ile Lys Asp Ser Leu Ala
Glu Val Glu 130 135 140
Glu Lys Tyr Lys Lys Ala Met Val Ser Asn Ala Gln Leu Asp Asn Glu 145
150 155 160 Lys Thr Asn Phe
Met Tyr Gln Val Asp Thr Leu Lys Asp Met Leu Leu 165
170 175 Glu Leu Glu Glu Gln Leu Ala Glu Ser
Arg Arg Gln Tyr Glu Glu Lys 180 185
190 Asn Lys Glu Phe Glu Arg Glu Lys His Ala His Ser Ile Leu
Gln Phe 195 200 205
Gln Phe Ala Glu Val Lys Glu Ala Leu Lys Gln Arg Glu Glu Met Leu 210
215 220 Glu Lys His Gly Ile
Ile Leu Asn Ser Glu Ile Ala Thr Asn Gly Glu 225 230
235 240 Thr Ser Asp Thr Leu Asn Asn Val Gly Tyr
Gln Gly Pro Thr Lys Met 245 250
255 Thr Lys Glu Glu Leu Asn Ala Leu Lys Ser Thr Gly Asp Gly Thr
Leu 260 265 270 Gly
Arg Ala Ser Glu Val Glu Val Lys Asn Glu Ile Val Ala Asn Val 275
280 285 Gly Lys Arg Glu Ile Leu
His Asn Thr Glu Lys Glu Gln His Thr Glu 290 295
300 Asp Thr Val Lys Asp Cys Val Asp Ile Glu Val
Phe Pro Ala Gly Glu 305 310 315
320 Asn Thr Glu Asp Gln Lys Ser Ser Glu Asp Thr Ala Pro Phe Leu Gly
325 330 335 Thr Leu
Ala Gly Ala Thr Tyr Glu Glu Gln Val Gln Ser Gln Ile Leu 340
345 350 Glu Ser Ser Ser Leu Pro Glu
Asn Thr Val Gln Val Glu Ser Asn Glu 355 360
365 Val Met Gly Ala Pro Asp Asp Arg Thr Arg Thr Pro
Leu Glu Pro Ser 370 375 380
Asn Cys Trp Ser Asp Leu Asp Gly Gly Asn His Thr Glu Asn Val Gly 385
390 395 400 Glu Ala Ala
Val Thr Gln Val Glu Glu Gln Ala Gly Thr Val Ala Ser 405
410 415 Cys Pro Leu Gly His Ser Asp Asp
Thr Val Tyr His Asp Asp Lys Cys 420 425
430 Met Val Glu Val Pro Gln Glu Leu Glu Thr Ser Thr Gly
His Ser Leu 435 440 445
Glu Lys Glu Phe Thr Asn Gln Glu Ala Ala Glu Pro Lys Glu Val Pro 450
455 460 Ala His Ser Thr
Glu Val Gly Arg Asp His Asn Glu Glu Glu Gly Glu 465 470
475 480 Glu Thr Gly Leu Arg Asp Glu Lys Pro
Ile Lys Thr Glu Val Pro Gly 485 490
495 Ser Pro Ala Gly Thr Glu Gly Asn Cys Gln Glu Ala Thr Gly
Pro Ser 500 505 510
Thr Val Asp Thr Gln Asn Glu Pro Leu Asp Met Lys Glu Pro Asp Glu
515 520 525 Glu Lys Ser Asp
Gln Gln Gly Glu Ala Leu Asp Ser Ser Gln Lys Lys 530
535 540 Thr Lys Asn Lys Lys Lys Lys Asn
Lys Lys Lys Lys Ser Pro Val Pro 545 550
555 560 Val Glu Thr Leu Lys Asp Val Lys Lys Glu Leu Thr
Tyr Gln Asn Thr 565 570
575 Asp Leu Ser Glu Ile Lys Glu Glu Glu Gln Val Lys Ser Thr Asp Arg
580 585 590 Lys Ser Ala
Val Glu Ala Gln Asn Glu Val Thr Glu Asn Pro Lys Gln 595
600 605 Lys Ile Ala Ala Glu Ser Ser Glu
Asn Val Asp Cys Pro Glu Asn Pro 610 615
620 Lys Ile Lys Leu Asp Gly Lys Leu Asp Gln Glu Gly Asp
Asp Val Gln 625 630 635
640 Thr Ala Ala Glu Glu Val Leu Ala Asp Gly Asp Thr Leu Asp Phe Glu
645 650 655 Asp Asp Thr Val
Gln Ser Ser Gly Pro Arg Ala Gly Gly Glu Glu Leu 660
665 670 Asp Glu Gly Val Ala Lys Asp Asn Ala
Lys Ile Asp Gly Ala Thr Gln 675 680
685 Ser Ser Pro Ala Glu Pro Lys Ser Glu Asp Ala Asp Arg Cys
Thr Leu 690 695 700
Pro Glu His Glu Ser Pro Ser Gln Asp Ile Ser Asp Ala Cys Glu Ala 705
710 715 720 Glu Ser Thr Glu Arg
Cys Glu Met Ser Glu His Pro Ser Gln Thr Val 725
730 735 Arg Lys Ala Leu Asp Ser Asn Ser Leu Glu
Asn Asp Asp Leu Ser Ala 740 745
750 Pro Gly Arg Glu Pro Gly His Phe Asn Pro Glu Ser Arg Glu Asp
Thr 755 760 765 Arg
Gly Gly Asn Glu Lys Gly Lys Ser Lys Glu Asp Cys Thr Met Ser 770
775 780 154342DNAHomo sapiens
15ccgtgggacg ggcggaggcg cccgagtccc gcttccccgg cgcccttcca ccccgagccc
60gactcagccc gcggccacct gcgccccgcc cctgtcggcc gcgcccgagc ccagcgccgc
120gagccgctcc ccggcgggct ggctcctggc cccggaagcg cgagcgttca cttagcggcg
180agtggctccg tctccgcgga cagagcgcgc gccccctggc ccggcccgcg aggggctccc
240ggcgcggtcc ccgagcattt cccgccgggt ggagcgggcc gagcccggca ggatgaccag
300ccccgcggcc gctcaaagcc gggagatcga ctgtttgagc ccggaagcgc agaagctggc
360ggaagcccgg ctcgctgcaa aacgggcggc ccgcgcggag gctcgcgaga tccgcatgaa
420ggagctggag cggcagcaga aggaggtaga agagagacca gaaaaagatt ttactgagaa
480ggggtctcgt aacatgccgg gcctgtctgc agccacgctg gcctctctgg gtgggacttc
540ctctcggaga ggcagcggag acacctccat ctccatcgac accgaggcat ccatcaggga
600aatcaaggac tctctagcag aagttgaaga gaaatataag aaggctatgg tttccaatgc
660tcagctagac aatgaaaaga caaacttcat gtaccaggtt gataccctaa aagatatgtt
720gctggagctt gaagaacagc tggctgaatc taggcggcag tacgaagaga aaaacaaaga
780atttgaaagg gaaaaacacg cccacagtat actgcaattt cagtttgctg aagtcaagga
840ggccctgaag caaagagagg aaatgctcga gaaacatgga ataatcctaa attcagaaat
900agctaccaat ggagagactt ccgacaccct caataatgtt ggataccaag gtcctaccaa
960gatgacaaaa gaagagttaa atgccctcaa gtcgacaggg gatgggaccc taggaagagc
1020cagtgaagtg gaggtgaaaa atgaaatcgt ggcgaatgtg gggaaaagag aaatcttgca
1080caatactgag aaagaacaac acacagagga cacagtgaag gactgtgtgg acatagaggt
1140attccctgct ggtgagaata ccgaggacca gaaatcctct gaagacactg ccccattcct
1200aggaacctta gcaggtgcta cctatgagga acaggttcaa agccaaattc ttgagagcag
1260ttctctccct gaaaacacag tacaggttga gtcaaatgag gtcatgggtg caccagatga
1320caggaccaga actccccttg agccatccaa ctgttggagt gacttagatg gtgggaacca
1380cacagagaat gtgggagagg cagcagtgac tcaggttgaa gagcaggcag gcacagtggc
1440ctcgtgtcct ttagggcata gtgatgacac agtttatcat gatgacaaat gtatggtaga
1500ggtcccccaa gagttagaga caagcacagg gcatagttta gagaaagaat tcaccaacca
1560ggaagcagct gagcccaagg aggttccagc gcacagtaca gaagtaggta gggatcacaa
1620cgaagaagag ggtgaagaaa caggattaag ggacgagaaa ccaatcaaga cagaagttcc
1680tggttctcca gcaggaactg agggcaactg tcaggaagcg acaggtccaa gtacagtaga
1740cactcaaaat gaacccttag atatgaaaga gcccgatgaa gaaaagagtg accaacaggg
1800agaggcattg gactcatcgc agaagaagac aaagaacaag aaaaagaaaa acaagaagaa
1860aaaatcccca gtacccgtag aaacccttaa agatgttaaa aaagagttaa cgtatcagaa
1920cacagattta agtgaaatta aggaagaaga gcaggtaaag tctactgaca gaaagtcagc
1980agtggaagcc caaaacgagg tgactgaaaa tccaaaacag aaaattgcag cagaaagcag
2040tgaaaatgtt gattgtccgg agaatcctaa aattaagttg gatggaaaac ttgaccaaga
2100aggtgatgat gtacaaacag cagctgagga ggtactagct gatggagaca cattagattt
2160tgaggatgac accgttcaat catcaggccc gagggctggt ggtgaagaat tagatgaagg
2220tgttgcaaaa gataatgcta aaatagatgg tgccactcaa agcagtcctg cagaaccaaa
2280gagcgaagac gcagatcgct gcaccctgcc cgaacatgaa agtccctcac aggacattag
2340tgatgcctgt gaagcagaaa gtacagagag gtgtgagatg tcagaacatc caagtcagac
2400cgtcaggaaa gctttagaca gcaatagcct agagaacgat gacttgtcgg caccaggaag
2460agagccaggg cacttcaatc cagaaagcag agaagatacc agaggaggga atgagaaggg
2520caaaagcaaa gaagactgta ccatgtccta agctgaggca ggcggcaggc gcggtgcaca
2580ggaagtctca gtgtgaaggg gtcttttctc tccactgcca atgtaagtag aatgttctaa
2640attcatagag aggcactgta tgacaattac caggtgctct actgctttaa gttatagact
2700gttacttgta gatttccatg taatcattga ggttatcacc cagattagaa agacatattt
2760gttatcagtg tacgttctaa ttgagagcat tccagtagta tcaaacaata atgtctactg
2820tttatagtcc acttaataaa aatagaggca tttactattt gccttaggct gataggaatg
2880tgggttttct tgaccaaata tatcagcatc taattgaaat gaccaaatag cattcttaga
2940cttctgtatt atgaatataa ttgatattta aattaatgtc ttgttcacat atgtgtactt
3000tcatatttga ttttaaaatg tacattataa cctgtatggt attttattta aaggagataa
3060acagccaaat agcaaatagg tcactgaatg ataagatttg caccttagaa caataatcat
3120tttaaggata acaagtaaat gtctgaaagc atgaggggct ttatttgcct ttacctcata
3180tgagtctttg atcttgaacc gatacttttg gatctcattg ttgatatacc tgaatttact
3240ttgtaagaga ttttaacttc acttcatgct gatgatgtat caaattcatt ttatagaaag
3300atttaaagtt tttttctgga agtgatatat gtcaaattac atttcctact gcagtatttg
3360agcagggaca gtcatttttt aaatgttttt ggccgggcgt ggtggctcat gcctgtaatc
3420tcagtacatt gggaggccaa ggcaggtgga tcacctgagg tcaagagttc gaggccagcc
3480tggccaacat ggtgaaaccc tgtctctact aaaaatacaa aaaattggcc gggcgtgatg
3540gtgggcgcct gtaatcccag ccactccaga ggctgaggca ggagaatcgc ttgaacctgc
3600gaggcagaga ttgcagtgag ccaagatcaa gccattgtac tccagcctgg acaacaagag
3660cgaaactctg tctaaaaaaa aaaaaaaaaa cacacacaca cacaacacaa tgttttcacg
3720cctgtaaacc tagcacattg ggaagccaag gtgggaggat tgcttgaggc caggagttca
3780aggctgcagt gagctatgat tgcacactgt actctagcct gggagacaga gtgagacact
3840gtctctaaaa aaaaaaaaaa aaaaaaaaaa agtttttgaa ccttaaaata ctttgtttga
3900atttctaatc atcattcaaa agagcagtaa aaaatggtta cttgttcttg tacaagctac
3960taattagact atagtaggat attttaaaga gctgaatcac ttttggtatt ttggtataaa
4020tattttcatt tgttatgtcc cagtatattc ttactggaaa attcttgttt tgatctgcct
4080gaagaaaata tctgttttct atataaaaaa attttttaaa ataattgtaa agttagattt
4140aaaattgtaa aatataaaat cacaaaggaa tgtaccttat gaatgttgtt gacattttat
4200gaaattatgt ggattcatat tactgttaca agatagaatt gaatgcaaaa agaccaaaac
4260ctcaataaaa tttgaggaaa acgtgttatt atgtaattga aataaaaaca ttttataatt
4320gtgcaaaaaa aaaaaaaaaa aa
434216752PRTHomo sapiens 16Met Thr Ser Pro Ala Ala Ala Gln Ser Arg Glu
Ile Asp Cys Leu Ser 1 5 10
15 Pro Glu Ala Gln Lys Leu Ala Glu Ala Arg Leu Ala Ala Lys Arg Ala
20 25 30 Ala Arg
Ala Glu Ala Arg Glu Ile Arg Met Lys Glu Leu Glu Arg Gln 35
40 45 Gln Lys Glu Val Glu Glu Arg
Pro Glu Lys Asp Phe Thr Glu Lys Gly 50 55
60 Ser Arg Asn Met Pro Gly Leu Ser Ala Ala Thr Leu
Ala Ser Leu Gly 65 70 75
80 Gly Thr Ser Ser Arg Arg Gly Ser Gly Asp Thr Ser Ile Ser Ile Asp
85 90 95 Thr Glu Ala
Ser Ile Arg Glu Ile Lys Asp Ser Leu Ala Glu Val Glu 100
105 110 Glu Lys Tyr Lys Lys Ala Met Val
Ser Asn Ala Gln Leu Asp Asn Glu 115 120
125 Lys Thr Asn Phe Met Tyr Gln Val Asp Thr Leu Lys Asp
Met Leu Leu 130 135 140
Glu Leu Glu Glu Gln Leu Ala Glu Ser Arg Arg Gln Tyr Glu Glu Lys 145
150 155 160 Asn Lys Glu Phe
Glu Arg Glu Lys His Ala His Ser Ile Leu Gln Phe 165
170 175 Gln Phe Ala Glu Val Lys Glu Ala Leu
Lys Gln Arg Glu Glu Met Leu 180 185
190 Glu Lys His Gly Ile Ile Leu Asn Ser Glu Ile Ala Thr Asn
Gly Glu 195 200 205
Thr Ser Asp Thr Leu Asn Asn Val Gly Tyr Gln Gly Pro Thr Lys Met 210
215 220 Thr Lys Glu Glu Leu
Asn Ala Leu Lys Ser Thr Gly Asp Gly Thr Leu 225 230
235 240 Gly Arg Ala Ser Glu Val Glu Val Lys Asn
Glu Ile Val Ala Asn Val 245 250
255 Gly Lys Arg Glu Ile Leu His Asn Thr Glu Lys Glu Gln His Thr
Glu 260 265 270 Asp
Thr Val Lys Asp Cys Val Asp Ile Glu Val Phe Pro Ala Gly Glu 275
280 285 Asn Thr Glu Asp Gln Lys
Ser Ser Glu Asp Thr Ala Pro Phe Leu Gly 290 295
300 Thr Leu Ala Gly Ala Thr Tyr Glu Glu Gln Val
Gln Ser Gln Ile Leu 305 310 315
320 Glu Ser Ser Ser Leu Pro Glu Asn Thr Val Gln Val Glu Ser Asn Glu
325 330 335 Val Met
Gly Ala Pro Asp Asp Arg Thr Arg Thr Pro Leu Glu Pro Ser 340
345 350 Asn Cys Trp Ser Asp Leu Asp
Gly Gly Asn His Thr Glu Asn Val Gly 355 360
365 Glu Ala Ala Val Thr Gln Val Glu Glu Gln Ala Gly
Thr Val Ala Ser 370 375 380
Cys Pro Leu Gly His Ser Asp Asp Thr Val Tyr His Asp Asp Lys Cys 385
390 395 400 Met Val Glu
Val Pro Gln Glu Leu Glu Thr Ser Thr Gly His Ser Leu 405
410 415 Glu Lys Glu Phe Thr Asn Gln Glu
Ala Ala Glu Pro Lys Glu Val Pro 420 425
430 Ala His Ser Thr Glu Val Gly Arg Asp His Asn Glu Glu
Glu Gly Glu 435 440 445
Glu Thr Gly Leu Arg Asp Glu Lys Pro Ile Lys Thr Glu Val Pro Gly 450
455 460 Ser Pro Ala Gly
Thr Glu Gly Asn Cys Gln Glu Ala Thr Gly Pro Ser 465 470
475 480 Thr Val Asp Thr Gln Asn Glu Pro Leu
Asp Met Lys Glu Pro Asp Glu 485 490
495 Glu Lys Ser Asp Gln Gln Gly Glu Ala Leu Asp Ser Ser Gln
Lys Lys 500 505 510
Thr Lys Asn Lys Lys Lys Lys Asn Lys Lys Lys Lys Ser Pro Val Pro
515 520 525 Val Glu Thr Leu
Lys Asp Val Lys Lys Glu Leu Thr Tyr Gln Asn Thr 530
535 540 Asp Leu Ser Glu Ile Lys Glu Glu
Glu Gln Val Lys Ser Thr Asp Arg 545 550
555 560 Lys Ser Ala Val Glu Ala Gln Asn Glu Val Thr Glu
Asn Pro Lys Gln 565 570
575 Lys Ile Ala Ala Glu Ser Ser Glu Asn Val Asp Cys Pro Glu Asn Pro
580 585 590 Lys Ile Lys
Leu Asp Gly Lys Leu Asp Gln Glu Gly Asp Asp Val Gln 595
600 605 Thr Ala Ala Glu Glu Val Leu Ala
Asp Gly Asp Thr Leu Asp Phe Glu 610 615
620 Asp Asp Thr Val Gln Ser Ser Gly Pro Arg Ala Gly Gly
Glu Glu Leu 625 630 635
640 Asp Glu Gly Val Ala Lys Asp Asn Ala Lys Ile Asp Gly Ala Thr Gln
645 650 655 Ser Ser Pro Ala
Glu Pro Lys Ser Glu Asp Ala Asp Arg Cys Thr Leu 660
665 670 Pro Glu His Glu Ser Pro Ser Gln Asp
Ile Ser Asp Ala Cys Glu Ala 675 680
685 Glu Ser Thr Glu Arg Cys Glu Met Ser Glu His Pro Ser Gln
Thr Val 690 695 700
Arg Lys Ala Leu Asp Ser Asn Ser Leu Glu Asn Asp Asp Leu Ser Ala 705
710 715 720 Pro Gly Arg Glu Pro
Gly His Phe Asn Pro Glu Ser Arg Glu Asp Thr 725
730 735 Arg Gly Gly Asn Glu Lys Gly Lys Ser Lys
Glu Asp Cys Thr Met Ser 740 745
750
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